<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22305

Description Uncharacterized protein
SequenceMPLRIDVTCAPALTVGEIMADVMNVGVNLEAFSQAINAIQALRSSVTRVFDSLKDGMKNKETLEGREKAFIAEFQDNLQSVNRDLTELERLSNLVGRPSESHPLHNSGLLSLDPVQDKTPLYSQLLQAYKWSNKLQYHAGLASSLLNQQSLKRSANQIGASAKRRPKVQPSTLVLPIQYVDDVISRIGRMFPDMSIELFRPNGTSAVLLKSSWFSATETEGARMEMKEKRRGKGSKRSWQLCQEDYKCPFPSRGTLPVHAHRAHSARWPSWQAGPLGRSGGHLCASSPTRETTPQFTTKL
Length300
PositionTail
OrganismPygocentrus nattereri (Red-bellied piranha)
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Actinopterygii> Neopterygii> Teleostei> Ostariophysi> Characiformes> Characoidei> Pygocentrus.
Aromaticity0.06
Grand average of hydropathy-0.472
Instability index58.67
Isoelectric point9.64
Molecular weight33386.72
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22305
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     101.24|      28|      30|      83|     112|       1
---------------------------------------------------------------------------
   63-   81 (20.52/ 8.50)	...........LEGREKAFIAE.FQDNLQ.SV
   83-  112 (41.71/31.42)	RDLTELerLSNLVGRPSESHPL.HNSGLL.SL
  116-  145 (39.01/23.10)	QDKTPL..YSQLLQAYKWSNKLqYHAGLAsSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      95.74|      31|      31|     200|     230|       2
---------------------------------------------------------------------------
  169-  202 (44.07/27.84)	QPSTLVLPIQYVDDVISRIGRMfpDMSiELFRPN
  203-  233 (51.67/33.72)	GTSAVLLKSSWFSATETEGARM..EMK.EKRRGK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.59|      20|      34|     238|     257|       3
---------------------------------------------------------------------------
  238-  257 (43.08/24.84)	SWQ...LCQE.DYKC.PFPSRGTLP
  270-  294 (26.51/12.99)	SWQagpLGRSgGHLCaSSPTRETTP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22305 with Med27 domain of Kingdom Metazoa
Unable to open file!