<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22302

Description Uncharacterized protein
SequenceMKVVNLKQAILQAWKERWSDYQWAINIKKNCPKGATWDYLNLAEALLEQAMIGPSPNPLILSYLKYAISSQMVSCSSVLTAVSKVGNHPSNHFHSAEVIVLQQRFTRSACLGKAEECIGLCRALLGILVWLLQGCAWYCEKLREPGALPTGEVSLRACQERLEILLQRTKNRALVHIARLEEQASWTNVEQALIRLAENLSSLTNQMLRSKLEECVSLVKSIPQMLCIHCDPPVQTSFPSVHAFIMLEGTMNLTGETQPLVEQLMMIKRMQRIPAPLFVLEIWKACFTGLIESPEGTEELKWTAFTFLKIPQVLLRLKKYPQGEKDFMEDVNMAFEYLLKLTPLLDKADQRCKYVTVRHTIIGPRKTISMCSVGLAEDREYAPKLKTAENANIQPNPGLILRAEPTVTNILKTVDADHSKSPEGLLGVLGHMLSGKSLDLLLAAAAATGKLKSFARKFIKLNEFPKHISGEGSKSASVRALLFDISFLMLCHVVQTYGSEVILSEPSPSGETPFFETWLQMCMPEEGKTLNPDHPCFRPESGKVESLVALLNTSSEMKLVQMKWHEICLSTPAAILEVLNAWENGVLSVEAVQKITDNIKGKVCSMAICAVAWLVAHVRMLGLDEREKPQTMIRQLMTPLYGENTLQFYNERVVIMSSILEHMCADVFQQTGVSLRPALEGQEPIPYRSLLPPRQPIRQALQTHFRQVLAKGWVDSRTLHLLESLLHMGGVFWFTNNLVKELLKETRKEWAFRVVELLYSIFCLDLQQATLTLLGHILPNLLTDPAHWHKLADPPGRALAKLSVWCALSSFSSHHKVHTSARQRKRQREDIEDYSSLFPLDDTQPSKLMRLLSSNEDEPVVLSSPGDRTMSSSLSASQLHTVNMRDPLNRVLANLFLLISSILGSKTAGPQTQFVQSFVEECVECSEQGSRGSILQFMPFTMVSELMKLHALAKPKVVLSITDLTLPLGRRVAAKAIAAL
Length980
PositionTail
OrganismPygocentrus nattereri (Red-bellied piranha)
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Actinopterygii> Neopterygii> Teleostei> Ostariophysi> Characiformes> Characoidei> Pygocentrus.
Aromaticity0.07
Grand average of hydropathy-0.017
Instability index46.23
Isoelectric point8.35
Molecular weight109790.04
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22302
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.16|      10|      18|     239|     248|       1
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  239-  248 (17.80/ 9.85)	PSVHAFIMLE
  259-  268 (17.36/ 9.44)	PLVEQLMMIK
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      83.73|      26|     115|     412|     437|       2
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  412-  437 (46.43/28.24)	KTVDADHSK.SPE.GLLGVLGHMLSGKS
  528-  555 (37.30/21.28)	KTLNPDHPCfRPEsGKVESLVALLNTSS
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     289.21|      93|     117|     569|     666|       4
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  569-  666 (141.17/131.35)	LSTP.AAILEVLNAWENGVLSVEAVQKITDNIKGKVCSMAicAVAWLVAH.VRMLgLDEREKPQTMirQLMTPLYGENTLQFYNERVVIMSSILEHMCAD
  690-  784 (148.05/116.38)	LLPPrQPIRQALQTHFRQVLAKGWVDSRTLHLLESLLHMG..GVFWFTNNlVKEL.LKETRKEWAF..RVVELLYSIFCLDLQQATLTLLGHILPNLLTD
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      41.48|      11|     705|     206|     216|       5
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  206-  216 (20.47/11.72)	QMLRSKLEECV
  913-  923 (21.01/12.20)	QFVQSFVEECV
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.48|      13|      86|     286|     304|       6
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  273-  285 (24.06/22.52)	IPAPLFVLEI.WKA
  291-  304 (19.43/ 9.10)	IESPEGTEELkWTA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.47|      11|     674|     122|     136|       7
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  122-  136 (16.60/19.30)	RALLGILVWllqgCA
  797-  807 (21.86/12.38)	RALAKLSVW....CA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22302 with Med24 domain of Kingdom Metazoa
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