<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22291
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MELAYVCDWEKRPKSTHCPSIPLVSSWSCRNLVAFTTDLKNDDDDTKDVSHMIHIIDTEHPWDVFSINSGHSEVISCLEWDQSGSRLLSADGDGRIQCWSMSEHLVNSWESALSSSVDGDPIVALSWLHNGVKLALHVEMSGSTNFGEKFSRVKFSPSLTLFGGKPMEGWLAVTVSGLVTVSLLKPGGALLTASESLCRLRGRVALADIAFTGGGNIVVAATDGSSSSPVQFYKVVVSVVSEKCRIDTELLPSLFLRCTTDPLRRDKYPAVTHLKFLTRENSEQVLLCASNQSGSIVECWSLRKEGLPVNNIFQHRSPVVGEKQPTILKWRILTTTGDLERVSAVALPKLPISISNTDLKVASDTKFCPGLGLALAFHDGSIQILHRLSLHTMGVFYGAAQRPGDDAAIKRPRTTGPALHFKALQFSWTSLALAGVDGHGKLHMLRVSPSMGQVLDMNTTLRHLLFLLEYCMVTGYDWWDVLLHVQPSMVHNLVEKLHEEYMRQNQALQQVLATRIVAVKASLCKLSTATAARACDFHAKLLLIAISSTLKSLLRPHVLNTPDKSPGDRLTEICAKNTDTDIDKVMINLKTEEFVLDGPPLQSLQQLIQWVGDFVLYLLANLPNQGSAVRPGFGFMRDGASLGMLREMLVMIRIWGLLKPGCLPTFTAMSDNQDSMQLLFRLLTKLWLCSRDDGPPQEPDESLIDECCLLPSQLLVPSMDWLPVNDGIIVKLQGKLPLRLQFGKASSLQGVGGSSPLDVFTRSPGAQKMDNLRCIHMGVSPTEESKACTRCGCVTMLRSPNKTNAMKQWEQRWIKNCLCGGLWRRMPPTFT |
Length | 831 |
Position | Tail |
Organism | Poecilia mexicana |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi>
Actinopterygii> Neopterygii> Teleostei> Neoteleostei> Acanthomorphata>
Ovalentaria> Atherinomorphae> Cyprinodontiformes> Poeciliidae> Poeciliinae>
Poecilia.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.026 |
Instability index | 49.10 |
Isoelectric point | 7.74 |
Molecular weight | 91734.22 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP22291
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 151.96| 50| 209| 78| 127| 2
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17- 51 (33.15/13.51) .....................HCPSI.P..L.VSSWSCrnlvAFTTDLknDDDDTKDVSH
78- 127 (93.57/50.09) LEWDQSGSRLLSA.DGDGRI.QCWSM.SEHL.VNSWES....ALSSSV..DGDPIVALSW
277- 310 (25.24/ 8.71) LTRENSEQVLLCAsNQSGSIvECWSLrKEGLpVN..........................
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 175.84| 55| 314| 403| 464| 3
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403- 464 (77.06/78.04) PGDDAAIKRPRTTGPalhFKaLQFSWTSlALAGVDGHGKLHMLRVSPSmGQVLDmNTTLRHL
723- 777 (98.78/67.22) PVNDGIIVKLQGKLP...LR.LQFGKAS.SLQGVGGSSPLDVFTRSPG.AQKMD.NLRCIHM
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