<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22285

Description Uncharacterized protein
SequenceMKVVNLKQAILQAWKERWSDYQWAVNIKKNFPKGATWDYLNFAGSLAYLTLHPSTGRTMVSYSSVLTAISKFDGFSRELCVKSLLEIMDMFCHRLNCHGKAEECIGLCRALLGVVVWLLQGCAFYCDQLRELGPSASTEAILRACQERLHGLMSSTKNKALVHIARLEDPGSWGNVEETMIAVTDGLCNVPNETLRTSIEETLALVKSIPLMLSVQSEPPAHASFPSVHAFIMLEGTMNLTGETQPLVEQLMMIKRMQRIPGPLFVLEIWKACFTGLIESPEGTEELKWTAFTFLKIPQVLLRLKKYPQGDKGQDFTEDVNIAFQYLLKLTPLLDKADQRCNCDCLGMLLQECNKLGLLSDSNTEGLTSKRNEDREFAPRLKTAENANIQPNPGLILRAEPTVTNILKTVDADHSKSPEGLLGVLGHMLSGKSLDLLLAAAAATGKLKSFARKFIKLNEFPKHISGEGSKSASVRAQLFDISFLMLCHVVQTYGSEVILSDPSPSVETPFFETWLQTCMPEEGKTLNPDHPCFRPEPGKVESLVTLLNNSSEMKLVQVKWHEICLSTPAAILEVLNAWENGVLSVEAVQKITDNIKGKVCSMAICAVAWLVAHVRMLGRDEREKPQTMIRQLVTPLYAENTMQFYNERVVIMSSIMEHMCADVFQQTGAMLRSPIEGQEPIAYRNLLPPKEPIHQSLSKQFQVVLRKGWVDSRALHLFESLLNMGGVFWFTNNLIKELLKETRQEWASRVVELLYSIFCLDMQQITLTLLGTILPNLLTDSAHWHSLADPPGKALAKLSVWCALSSYSSHHKGPFSARQRKRQREDIEDYNSLFPLDDTQPSKLMRLLSSNEDEPVALSSPGDRSMSSSLSPSQLHTVNMRDPLNRVLANLFLLFSSILGSKMAGPHTQFVQSFLEECVECLEQGSRGSILQFMPFTMVSELVKLPALAKPKVVLAITDLNLPLGRRVAAKAISAL
Length976
PositionTail
OrganismPoecilia latipinna (sailfin molly)
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Actinopterygii> Neopterygii> Teleostei> Neoteleostei> Acanthomorphata> Ovalentaria> Atherinomorphae> Cyprinodontiformes> Poeciliidae> Poeciliinae> Poecilia.
Aromaticity0.07
Grand average of hydropathy-0.051
Instability index48.39
Isoelectric point6.66
Molecular weight108972.41
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22285
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     149.73|      35|      35|      74|     108|       1
---------------------------------------------------------------------------
   74-  108 (64.23/34.89)	GFSRELCVKSLLEIMDMFCHRLNCHGKA...EECI.....GLC
  114-  145 (37.00/17.37)	......VVVWLLQGCAFYCDQLRELGPSastEAIL.....RAC
  151-  188 (48.50/24.77)	GLMSSTKNKALVHIARL..EDPGSWGNV...EETMiavtdGLC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.42|      20|      24|     281|     304|       2
---------------------------------------------------------------------------
  281-  301 (31.66/26.79)	PEG......TEELKwTAFTF.LKIPQVL
  308-  334 (24.76/ 7.82)	PQGdkgqdfTEDVN.IAFQYlLKLTPLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.65|      10|      35|     471|     480|       4
---------------------------------------------------------------------------
  471-  480 (16.72/10.23)	SASVRAQLFD
  503-  512 (18.93/12.59)	SPSVETPFFE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.05|      17|      20|     848|     866|       6
---------------------------------------------------------------------------
  848-  864 (28.67/24.43)	LSSNEDEPVALSSPGDR
  870-  886 (30.38/17.31)	LSPSQLHTVNMRDPLNR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      81.37|      26|     115|     408|     433|       7
---------------------------------------------------------------------------
  408-  433 (43.99/27.55)	KTVDADHSK.SPE.GLLGVLGHMLSGKS
  524-  551 (37.38/22.24)	KTLNPDHPCfRPEpGKVESLVTLLNNSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.50|      16|      25|     607|     622|      10
---------------------------------------------------------------------------
  607-  622 (28.94/21.59)	VAWLVAHVRMLGRDER
  633-  648 (29.56/22.22)	VTPLYAENTMQFYNER
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22285 with Med24 domain of Kingdom Metazoa
Unable to open file!