<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22279
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MDVAYVCEWEKRPKSNHCPSIPLVCAWSCRNLIAFTTDLKNEEDEKDLSHMIHIIDTEHPWDVYSINSGHTEIISCLEWDQSGSRLLSADGDGQIKCWGMTEHLVNSWECTMGSAVEGDPIVALSWLHNGVKLALHVEKSGSTNFGEKFSRVKFSPSLTLFGGKPMEGWLAVTVSGLVTVSLLKPSGALLTASESLCRLRGRVALADIAFTSGGNIVVAAADGSSSSPVQFFKVCVSVVNEKCRIDTELLPSLFMRLTIDAVRREKYPAVTHLKFLTRENSEQVLLCASSQMGSIVECWSLRKEGLPVNNIFQHRSPVVGEKQPTILKWRILSATNDLDRVSAIALPKLPISISNTDLKVASDTKFCPGLGLALAFHDGSIQILHRLSLHTMGVFYGPASCGPSQRVGEESAIKRQRGPGPAAHFKALQFSWTSLALVGIDNHGKLHMIRVSPSMGQMLDMNTLLRHLLFLLEYCMVTGYDWWDVLLHVQPGMVHNLVEKLHEEYMRQNQALQQVLSTRIVAVKASLCKLSSATAARACDFHAKLLLIAISSTLKSLLRPHLLNTPDKTPGDRLAEICAKNTDTDIDKVMINLKTEEFVLDASTLQSLQQLIQWVGDFVLYLLANLPNQGSMVRPGFGFLRDGPSLGLLREMMVVIRIWGLLKPGCLPIYTATSDNQDSMFLLFRLLTKLWLCVRDEGHPQEPDEPLIDECCLLPSQLLVPTLDWLPINDGIICKLQGKHPLRLQFGKPHSLPGLGPGPPSQVEVFSRTPGSQRMDHLRCLHMGVCPTEDSKACTRYEAPPIRLPILSFSLFTAFCFLFCLSVHQLCSFCASLGQRSSSM |
Length | 840 |
Position | Tail |
Organism | Paramormyrops kingsleyae |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi>
Actinopterygii> Neopterygii> Teleostei> Osteoglossocephala>
Osteoglossomorpha> Osteoglossiformes> Mormyridae> Paramormyrops.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.051 |
Instability index | 40.77 |
Isoelectric point | 6.96 |
Molecular weight | 92993.05 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | integral component of membrane GO:0016021 IEA:UniProtKB-KW
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP22279
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 136.08| 42| 114| 216| 257| 1
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216- 257 (71.24/51.08) IVVAAADGSSSSPVQFFKVCVSVVNEKCRI..DTELLPSLFMRL
331- 374 (64.85/45.77) ILSATNDLDRVSAIALPKLPISISNTDLKVasDTKFCPGLGLAL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 138.91| 31| 335| 418| 453| 2
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418- 448 (57.63/31.26) GPGPAAHFKALQFS.WTSLA.LVGIDNHGKLHM
756- 783 (53.49/28.11) GPGPPSQVEV..FS.RTPGS.Q.RMDHLRCLHM
799- 824 (27.79/10.48) AP.P.IRLPILSFSlFTAFCfLFCLSVH.....
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 114.47| 33| 45| 61| 93| 3
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61- 93 (59.61/41.83) WDVYSINSGHTEIISCLEWDQSGSRL.LSADGDG
108- 141 (54.86/37.84) WECTMGSAVEGDPIVALSWLHNGVKLaLHVEKSG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 99.21| 31| 181| 451| 492| 4
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451- 492 (45.72/54.46) VSPSMGQMLDMNT..LLRHLLFLLEYcmvtgydwWDVLlhvQPG
633- 665 (53.48/32.49) VRPGFGFLRDGPSlgLLREMMVVIRI........WGLL...KPG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 61.50| 20| 349| 178| 211| 6
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191- 211 (28.72/15.81) TASESlCRLRGRVALADIAFT
534- 553 (32.78/20.31) TAARA.CDFHAKLLLIAISST
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