<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22278
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MDVAYVCEWEKRPKSNHCPSIPLVCAWSCRNLIAFTTDLKNEEDEKDLSHMIHIIDTEHPWDVYSINSGHTEIISCLEWDQSGSRLLSADGDGQIKCWGMTEHLVNSWECTMGSAVEGDPIVALSWLHNGVKLALHVEKSGSTNFGEKFSRVKFSPSLTLFGGKPMEGWLAVTVSGLVTVSLLKPSGALLTASESLCRLRGRVALADIAFTSGGNIVVAAADGSSSSPVQFFKVCVSVVNEKCRIDTELLPSLFMRLTIDAVRREKYPAVTHLKFLTRENSEQVLLCASSQMGSIVECWSLRKEGLPVNNIFQHRSPVVGEKQPTILKWRILSATNDLDRVSAIALPKLPISISNTDLKVASDTKFCPGLGLALAFHDGSIQILHRLSLHTMGVFYGPASCGPSQRVGEESAIKRQRGPGPAAHFKALQFSWTSLALVGIDNHGKLHMIRVSPSMGQMLDMNTLLRHLLFLLEYCMVTGYDWWDVLLHVQPGMVHNLVEKLHEEYMRQNQALQQVLSTRIVAVKASLCKLSSATAARACDFHAKLLLIAISSTLKSLLRPHLLNTPDKTPGDRLAEICAKNTDTDIDKVMINLKTEEFVLDASTLQSLQQLIQWVGDFVLYLLANLPNQGSMVRPGFGFLRDGPSLGLLREMMVVIRIWGLLKPGCLPIYTATSDNQDSMFLLFRLLTKLWLCVRDEGHPQEPDEPLIDECCLLPSQLLVPTLDWLPINDGIICKLQGKHPLRLQFGKPHSLPGLGPGPPSQVEVFSRTPGSQRMDHLRCLHMGVCPTEDSKACTRCGCVTMLHSPNKTTAVKQWEQRWMKNCLCGGLWRRVHSSMS |
Length | 837 |
Position | Tail |
Organism | Paramormyrops kingsleyae |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi>
Actinopterygii> Neopterygii> Teleostei> Osteoglossocephala>
Osteoglossomorpha> Osteoglossiformes> Mormyridae> Paramormyrops.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.016 |
Instability index | 43.05 |
Isoelectric point | 7.71 |
Molecular weight | 92824.84 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP22278
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 136.08| 42| 114| 216| 257| 1
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216- 257 (71.24/49.41) IVVAAADGSSSSPVQFFKVCVSVVNEKCRI..DTELLPSLFMRL
331- 374 (64.85/44.28) ILSATNDLDRVSAIALPKLPISISNTDLKVasDTKFCPGLGLAL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 141.66| 31| 335| 418| 453| 2
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418- 448 (56.91/25.72) GPGPAAHFKALQFSWTSLALVGIDNHGKLHM
756- 783 (52.57/22.96) GPGPPSQVEV..FSRTPGSQ.RMDHLRCLHM
805- 826 (32.17/10.01) SPNKTTAVKQWEQRWMKNCLCG.........
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 114.47| 33| 45| 61| 93| 3
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61- 93 (59.61/32.95) WDVYSINSGHTEIISCLEWDQSGSRL.LSADGDG
108- 141 (54.86/29.80) WECTMGSAVEGDPIVALSWLHNGVKLaLHVEKSG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 95.03| 31| 181| 449| 492| 4
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449- 492 (41.42/40.89) IRvsPSMGQMLDMNT..LLRHLLFLLEYcmvtgydwWDVLlhvQPG
633- 665 (53.61/23.23) VR..PGFGFLRDGPSlgLLREMMVVIRI........WGLL...KPG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 43.68| 15| 514| 169| 199| 6
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170- 185 (19.96/13.15) LAVTVSGLVTvSLLKP
546- 560 (23.73/10.48) LLIAISSTLK.SLLRP
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