<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22273

Description Uncharacterized protein
SequenceMKVVNLKQAILQAWKERWSDYQWAVNIKRNFPKGATWDYLNLAEALMEQAMIGPSPNPLILSYLKYAISSQMVSYSSVLTAVSKFDDFSRELCVKALLEIMDMFTHRLSCHGKAEECIGLCRALLGATVWLLQGCAWYCERLREQGESGGGEAGLHACLQRLEGLLQSTKNKGLIHIARLEEPASWSNVEQALARVSDSLNSLTNQTLKGKLEECVSHVKSIPQMLTVQPEPPLHTTFPSIHAFVMLEGTMNLTGEMQPLVEQLMMIKRMQRIPTPLFVLEIWKACFTGLIESPEGTEELKWTAFTFLKIPQVLLRLKKYPQGEKDFMDDVNVAFEYLLKLTPLLDKADQRCNCDCLSLLLQECNKLGLLSESNTANLTAKRAEDREYAPRLKTAENANIQPNPGLILRAEPTVTNILKTVDADHSKSPEGLLGVLGHMLSGKSLDLLLAAAAATGKLKSFARKFIKLNEFPKHISGEGSKSASVRALLFDISFLMLCHVVQTYGSEVILSEPSPSGETPFFETWLQTCMPEEGKTLNPDHPCFRPESGKVESLVALLNNSSEMKLIQMKWHEICLCTPAAVLEVLNAWENGVLSVESVQKITDNIKGKVCSMAVCAVAWLVAHVRMLGLDEREKPQTMIRQLMTPLFGENMLQFYNERVLIMSSILEHMCADVFQQTGMTLRPPMEGQEPVPYRGLLAPREPIQEALSRQLRAVLRKGWVDGGALHLLESLLQMGGVFWFTNNLVKELLKETRQEWATRAVELLYSIFSLDTHQITLTLLGHILPNLLTDPAHWHGLADPPGKALAKLSVWCALSSYSSHHKGQISARQRKRQREDIEDYSSLFPLDDTQPSKLMRLLSSNEDEPSVLSSPGERSMSSSLSASQFHTVNMRDPLNRVLANLFLLISNILGSKTAGSHTQFVQSFMEECVECLEQGCRGSILQFMPFTMVSELVKLPDLAKPKVVLAITDLTLPLGRRVAAKAIAAL
Length987
PositionTail
OrganismParamormyrops kingsleyae
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Actinopterygii> Neopterygii> Teleostei> Osteoglossocephala> Osteoglossomorpha> Osteoglossiformes> Mormyridae> Paramormyrops.
Aromaticity0.07
Grand average of hydropathy-0.064
Instability index47.58
Isoelectric point6.42
Molecular weight110204.92
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
enteric nervous system development	GO:0048484	IEA:Ensembl
interstitial cell of Cajal differentiation	GO:0061453	IEA:Ensembl
retinal cone cell development	GO:0046549	IEA:Ensembl
thymus development	GO:0048538	IEA:Ensembl









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22273
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      83.78|      26|     115|     419|     444|       1
---------------------------------------------------------------------------
  419-  444 (45.60/27.06)	KTVDADHSK.SPE.GLLGVLGHMLSGKS
  535-  562 (38.18/21.48)	KTLNPDHPCfRPEsGKVESLVALLNNSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.23|      19|      36|     107|     142|       2
---------------------------------------------------------------------------
  111-  136 (26.77/52.02)	HGKAEeciGLCRALLGATVWllqgCA
  796-  814 (37.46/12.58)	HGLAD...PPGKALAKLSVW....CA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.53|      25|      33|     159|     185|       3
---------------------------------------------------------------------------
  159-  185 (36.03/28.64)	LQRLEGLLQSTKNKGLihIARLEEPAS
  193-  217 (40.50/25.10)	LARVSDSLNSLTNQTL..KGKLEECVS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.36|      18|      36|     717|     735|       5
---------------------------------------------------------------------------
  717-  735 (28.20/20.86)	RKGWvDGGALHLLESLLQM
  754-  771 (31.16/18.44)	RQEW.ATRAVELLYSIFSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     155.76|      48|     222|     627|     680|       7
---------------------------------------------------------------------------
  627-  680 (73.55/65.22)	MLGLDErEKPQTMIRQLMTPLFGENMLQFYNERVliMSSileHMCADVFQQTGM
  844-  891 (82.21/53.66)	LFPLDD.TQPSKLMRLLSSNEDEPSVLSSPGERS..MSS...SLSASQFHTVNM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.57|      11|      28|     304|     314|       8
---------------------------------------------------------------------------
  304-  314 (19.61/11.36)	AFTF.LKIPQVL
  334-  345 (14.96/ 6.98)	AFEYlLKLTPLL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22273 with Med24 domain of Kingdom Metazoa
Unable to open file!