<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22210

Description Uncharacterized protein
SequenceMMDRLLDLDLLIMYTTVELSEWKETVTVKKLRATVGELRSTVKKLRATVGELRSELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKNTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVGELRSTVKKLRATVIVIGLFWFNECAGHCRFLCFWTGYVINIKMFVVKKVFYILKPY
Length1122
PositionMiddle
OrganismAstyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus)
KingdomMetazoa
LineageEukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Actinopterygii> Neopterygii> Teleostei> Ostariophysi> Characiformes> Characoidei> Characidae> Astyanax.
Aromaticity0.01
Grand average of hydropathy-0.302
Instability index47.87
Isoelectric point11.86
Molecular weight124221.08
Publications
PubMed=25329095

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:InterPro

GO - Biological Function
GO - Biological Process
signal transduction	GO:0007165	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22210
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
            38|    2328.91|      26|      26|      62|      87|       1
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   30-   50 (48.69/18.20)	.......KLRATVGELRSTVKKLRATVG
   55-   82 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
   83-  110 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  111-  138 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  139-  166 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  167-  194 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  195-  222 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  223-  250 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  251-  278 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  279-  306 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  307-  334 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  335-  362 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  363-  390 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  391-  418 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  419-  446 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  447-  474 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  475-  502 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  503-  530 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  531-  558 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  559-  586 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  587-  614 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  615-  642 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  643-  670 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  671-  698 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  699-  726 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  727-  754 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  755-  782 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  783-  810 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  811-  838 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  839-  866 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  867-  894 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  895-  922 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  923-  950 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
  951-  970 (37.66/12.60)	ELRSTvkKLRATVGELRS.......TV.
  971-  996 (46.82/17.26)	..KNTvkKLRATVGELRSTVKKLRATVG
  997- 1024 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
 1025- 1052 (62.95/25.45)	ELRSTvkKLRATVGELRSTVKKLRATVG
 1053- 1079 (55.40/21.61)	ELRSTvkKLRATVGELRSTVKKLRATV.
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22210 with Med4 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




NANANA









Molecular Recognition Features






MoRF SequenceStartStop




NANANA