<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22169

Description Uncharacterized protein
SequenceMVTDGLAAKTTAQEFAVEKLYHEICYKKTPRRIAWSPQNLIAWSPINNDAFDTRHQGSVPSIGIFNPCRLPSEDGSAGSTWSFTEKNNFFPLNDIEKHHRHGDEITDLVWNQTGSALASIDQRGKIALWMMDNFVNQWKCICDVDLSGSIVEFSWLDYVRVYSRVSGTPMYKRGTFKGPRNQFGELAFLTVTSDGKVTVCYQDGKRNFLKISAELPFISGRISRISHADLILNKDGHYILAIHCPEYCQKIVMFYEISVDMLKLQIKCQPIADVHLTAHINDSSFTIDRARAPTIHLKLLSDSQDNLIKLIVVTADKTDNDDGTKIFNSDVIMWELKASSTSSEVEFSNLSLQDDDHSKEIHFVAGTHLPGQLVTNIWIHKGELFIGLSNGQMQFHNCTTLQILPHVGQSMIKLFKNDHFPTYSTWISHNGQDASSTNAITEFATSPNGTLLLCGRLSGKLDCFDMADINWTSSQTNIDIMDLFQVAYACINQLTLSILNNTDHTDLENIVKKHSNIYISAISEHNDPLELILQKIFSNISSVFPNGFESTISSDFLIRLFGLQLSLLKSCGRDNITYLNTLCIMHLRALEITFRNSIISPRNNISSDEVSFVAANEKSHIVLLYHFISRSALKYLISHVGKFEKYITKLYTTNPGDPNNKKMHQSLQYSFEKWPLKLDLLELFINESSKVIEKALSGVGIILQYEMYKTQGGQKATQDLVFAGDFGLILEINNVFILIFVLMES
Length745
PositionTail
OrganismGigaspora rosea
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Glomeromycotina> Glomeromycetes> Diversisporales> Gigasporaceae> Gigaspora.
Aromaticity0.10
Grand average of hydropathy-0.124
Instability index38.08
Isoelectric point6.03
Molecular weight84123.02
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22169
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     184.43|      41|      93|      32|      72|       1
---------------------------------------------------------------------------
   32-   72 (75.11/46.01)	RIA.WSPQNLI.AWSPINNDAFDTRHQGSVPSIGIFNP..CRLPS
   80-  119 (53.25/30.53)	..T.WSFTEKN.NFFPLNDIEKHHRHGDEITDL.VWNQtgSALAS
  125-  163 (56.06/32.51)	KIAlWMMDNFVnQWKCI....CDVDLSGSIVEFSWLDY..VRVYS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     256.86|      53|      95|     397|     449|       2
---------------------------------------------------------------------------
  248-  294 (50.29/28.72)	.CQKIVMFYEISVDMLKL...............qIKCQ..P...IADVHLT.AHINDSSFT...IDRARA..PT.
  297-  349 (27.14/12.04)	....LKLLSDSQDNLIKLivvtadktdnddgtkiFNSDVI.......MW.....ELKASSTSSEVEFSN......
  351-  383 (22.68/ 8.82)	...SLQDDDH..SKEIHF................VAGTHLPgqlVTNIWI..HKGE...................
  397-  449 (93.71/60.00)	NCTTLQILPHVGQSMIKL................FKNDHFP...TYSTWIS.HNGQDASSTNAITEFATS..PNG
  492-  547 (63.04/37.90)	NQLTLSILNNTDHTDLEN................IVKKHSN...IYISAISeHNDPLELILQKIFSNISSvfPNG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.85|      15|      26|     610|     625|       3
---------------------------------------------------------------------------
  610-  625 (21.37/18.77)	VSFVAANEKsHIVLLY
  637-  651 (27.47/18.83)	ISHVGKFEK.YITKLY
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22169 with Med16 domain of Kingdom Fungi
Unable to open file!