<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22110

Description Uncharacterized protein
SequenceMAVVDDTMTIYVSSSGSVRNTGVPGTMTSITEIVEEPSINVVNDTIYVAVAKDVKDSQLNLIWALQNSRGNKVCILHVHVPAAMIPLMGAKFPASSLKEQEVQAYREIERQSMHKTLDEYLRTCQQMGVRAEKLHIEMDCIEKGIIELISQYNIQELVMGAASNKHYSRRMMDLRSKKAIYVCEQAPTSCRIQFICKGFLIHTRNRNSDGGNVDVTSPSVQEVPNSGAGHLPQLRSQSFELGQNHFVKLTNPAQELFRRVRSSNDGHESDGLSRRSPSISSTRSHNCSVEPVLTPNLIIEGSENAVELTLSNFSLDLHDSSPPSILDGGTYDTLYDQLEQVMAEAENARRDAYHEIVRRGKAEKEAIDAIRKVKTTEISYKEELKLRKELEEVLEKEKEELDNMKSERDKVKEELQHVLDQKSLLGSQITSNELMIKELEEKIISAVDLLRDYKDERDELQMQRDNALREAEELRRKQGESSSTQVLQFFSEFSFLEIEEATRKFDPNLKIGEGGYGSIFKGLMRHTEVAIKVLHADSMQGPSEFQQEVDVLSKIRHPNLITLIGACPESWTLVYEFLPNGSLEDRLCCKDNTAPLSWQSRIRISAELCSALIFLHSSKPHSIVHGDLKPSNILLDANLVSKLSDFGICRILSCGDSCSNNNTQFWKTDPKGTFVYMDPEFLASGELTPKSDVYSFGIILLRILTGRSALGIVKEVKYALDTGKLKTLLDPLAGDWPFVQAEQLTHLALRCCEMNRNSRPDLHSDVWRMLELMRASYGGANTFGLGSQGFHQPPACFICPIFQEIMSNPHVAADGFTYEAEAIKGWLESGHDTSPMTNSKLSHYNIVPNRAIHSAIQDWLQTQ
Length863
PositionTail
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.06
Grand average of hydropathy-0.382
Instability index50.98
Isoelectric point5.58
Molecular weight96972.99
Publications
PubMed=27557478

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22110
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     112.44|      31|      48|     382|     412|       1
---------------------------------------------------------------------------
  382-  412 (49.10/33.30)	EELKLRKELEEVLEKEKEELDNMKSERDKVK
  432-  461 (46.74/31.34)	NELMI.KELEEKIISAVDLLRDYKDERDELQ
  464-  480 (16.60/ 6.26)	RDNALR.EAEELRRKQGE.............
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     192.50|      48|      49|     609|     657|       2
---------------------------------------------------------------------------
  560-  610 (50.97/30.84)	.LITLIGACPESwtLVY.EFLPNGSLED.RLCCK.........dntaplswqSRIRISAELCS
  611-  659 (81.97/58.66)	ALIFLHSSKPHS..IVHGDLKPSNILLDANLVSKlSD...FGI.........CRILSCGDSCS
  662-  708 (59.56/37.31)	NTQFWKTDPKGT..FVYMD..P.EFLASGELTPK.SDvysFGI.......ilLRILT.GRS..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     259.70|      66|     280|     493|     559|       3
---------------------------------------------------------------------------
  199-  278 (67.43/44.79)	..FL.IHTRNRNSDggnvdvtspsvqevPN.....SGAGHLPQ.....LRSQSFELG.QNHFVKLTNPAQelFRrvrssndgHESDGLSR.RSPS
  313-  377 (84.39/58.07)	FS.LDLHDSS...P..............PSI.LDGGTYDTLYDQLeqvMAEAENARRdAYHEIVRRGKAE...K........EAIDAIRKVKTTE
  493-  559 (107.88/81.16)	FSFLEIEEATRKFD..............PNLkIGEGGYGSIFKGL...MRHTEVAIK.VLHADSMQGPSE..FQ........QEVDVLSKIRHPN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      99.72|      32|     264|      12|      46|       4
---------------------------------------------------------------------------
   12-   46 (45.32/43.75)	VSSSGSvRNTGVPGTMTsiTEIVEEPSINVVNDTI
  279-  310 (54.40/39.49)	ISSTRS.HNCSVEPVLT..PNLIIEGSENAVELTL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.38|      14|     608|     129|     142|       5
---------------------------------------------------------------------------
  129-  142 (26.14/15.92)	VRAEKL.HIEMDCIE
  739-  753 (22.25/12.56)	VQAEQLtHLALRCCE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.01|      13|      30|     771|     783|       7
---------------------------------------------------------------------------
  771-  783 (23.20/16.81)	ELMRASYGGANTF
  804-  816 (23.81/17.46)	EIMSNPHVAADGF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      30.25|       7|     601|     187|     196|       8
---------------------------------------------------------------------------
  187-  196 (12.19/15.73)	PTSCriqFIC
  793-  799 (18.06/11.01)	PPAC...FIC
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22110 with Med32 domain of Kingdom Viridiplantae
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