<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22104

Description Uncharacterized protein
SequenceMDSIKEKSECSSSLVVAVAIKGNKKSRYVVQWALNKFVPEGMIIFKLIHVHAVGILIPLSQARNDVVTAFKSEVEWQRNQMLQPFKKMCEHRKVHVDVVILESDDVATAVAEEVAKGPTTKLVVGASSRGIFTSKHKGLSAKISVCTPRFCTVYAVSKGKLLIRPSDMQIDESIMDDGASETSFSSNSSSKYTSTSQTDSVSVATYPSMHSSSLATQRFQALSSINQTLLSTSSSIMESNHSRGQSLDIGRENTATSSARNSDYALSRASSCKSIISDPGSWMYDQNSTKDVPLLSELLSPNRQADINLELEKLRIELRHAQGMHAVAQSENIDASRKLNDLSKKRSEESMKLKEVIAKEELANKFANYEREKYEAAAKEASYLKECAEREASERKEVELKAIHAAKEKVKLEDALSGSSPQYRKFTWDEIVSATSSFSEELKIGIGAYGIVYKCSLYHTTVAVKVLHSIGNHKSKQFQQELEILSKIHHPNLLLLLGACPDHGCLVYEYMENGNLEERLLQKNSTAPIPWFERYRIAWEVASALAFLHSSKPTPIIHRDLKPANILLGRNLVSKIGDVGLSTMLHTDNLSTMYKDTEPVGTLCYIDPEYQRSGVISEKSDVYAFGMVILQLLTAKPAIALTHVIETAIDDGNLIDILDPEAGTWPFPETLDLARLGLSCAELRRRDRPDLKDHVLPTLERLKEVADRAQHSASVVTIKSRSPNHFICPILQDVMDDPCVAADGYTYDRKAIEKWFRENDKSPMTNMALPHKNLIPNYTLLSAIMEWRSRQI
Length792
PositionTail
OrganismLupinus angustifolius (Narrow-leaved blue lupine)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> genistoids sensu lato> core genistoids> Genisteae> Lupinus.
Aromaticity0.06
Grand average of hydropathy-0.319
Instability index43.50
Isoelectric point6.80
Molecular weight88324.76
Publications
PubMed=27557478

Function

Annotated function Functions as an E3 ubiquitin ligase. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22104
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     100.09|      35|      39|     344|     382|       1
---------------------------------------------------------------------------
  344-  382 (50.86/40.87)	KKRSE.ESMKLKEViakeELANKFANYEREKYEAAAKEAS
  385-  420 (49.23/30.55)	KECAErEASERKEV....ELKAIHAAKEKVKLEDALSGSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     112.66|      37|      43|      32|      74|       2
---------------------------------------------------------------------------
   32-   74 (54.78/56.01)	WALNKFV.P.EGMIIFKLIHVHAVgILiplsqARNDVVTAFKSEV
   76-  114 (57.88/40.52)	WQRNQMLqPfKKMCEHRKVHVDVV.IL.....ESDDVATAVAEEV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.65|      32|      43|     181|     212|       7
---------------------------------------------------------------------------
  181-  212 (52.95/31.68)	ETSFSSNSSSKYTSTSQTDSVSVATYPSMHSS
  227-  258 (51.70/30.78)	QTLLSTSSSIMESNHSRGQSLDIGRENTATSS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22104 with Med32 domain of Kingdom Viridiplantae
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