<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22100

Description Uncharacterized protein
SequenceMEILQRPKSQRPDWLEDYELVGKIGEGTYGLVYLARNKDKSKGGQTALKKFKQSKEGDGVSPTAIREIMLLRECQHENVVKLVNVHINHFDSSLYLAFDYAEHDLYEIIRHHREKLNSHPISLYTVKSLLWQILNGLNYLHSNWIIHRDLKPSNILVMGQGDEEGVVKIGDFGLARIFQAPLKNLSENGVVVTIWYRAPELLLGSKHYTTAVDMWAVGCIFAELLTLKPLFQGQEDKNISNPLQADQLDKIFRVLGMPTVDLWPNLERLPHWQIIRNGAMMQKRYHHETILHEVCRLPPRTAAFDLLSRMLDYDPAKRLTAAQALEHDYFRQEPLPGRNSLVPPGDKAILYPQRPVDMSIDPGVVNHPQVAAGHHHHAAAGGGGAGIHPPHPHAHAHVHVHTHGAAAAVAIAGGGGGVGGGPMAHPSQHPHQIHQHAAYGLPQQHPNHPPHHLQQQQQQPPPPQGGMRRERSRLQQPYTGIYQPPQKISRNV
Length492
PositionKinase
OrganismChara braunii (Braun's stonewort)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Charophyceae> Charales> Characeae> Chara.
Aromaticity0.07
Grand average of hydropathy-0.492
Instability index44.89
Isoelectric point8.73
Molecular weight55197.32
Publications
PubMed=30007417

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22100
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      28.89|      12|      15|     299|     313|       1
---------------------------------------------------------------------------
  299-  313 (14.08/18.61)	P..R.TAAfDLLSRmlDY
  315-  329 (14.81/ 6.37)	PakRlTAA.QALEH..DY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      97.67|      20|      21|     422|     442|       2
---------------------------------------------------------------------------
  389-  419 (28.12/ 7.78)	P.PHPHAHAHvHVHTHGAAaavaiaggggGVG
  422-  442 (37.46/15.73)	PmAHPSQHPH.QIHQHAAY..........GLP
  444-  462 (32.09/ 9.55)	..QHPNHPPH.HLQQQQQQ..........PPP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.66|      17|     129|     130|     149|       3
---------------------------------------------------------------------------
  131-  147 (35.47/30.92)	WQIL.NG...LNYLHSNWIIH
  272-  292 (25.19/ 7.28)	WQIIrNGammQKRYHHETILH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.32|      10|      15|     342|     353|       4
---------------------------------------------------------------------------
  342-  353 (15.23/14.84)	VPPGdkAILYPQ
  360-  369 (20.09/11.43)	IDPG..VVNHPQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.50|      26|     142|      17|      44|       5
---------------------------------------------------------------------------
   17-   44 (42.37/28.95)	DYELVGKIGEgtYGL..VYLARNKDKSKGG
  162-  189 (42.13/22.89)	DEEGVVKIGD..FGLarIFQAPLKNLSENG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.22|      11|      20|     192|     202|       6
---------------------------------------------------------------------------
  192-  202 (21.14/12.50)	VTIWYRA...PELL
  212-  225 (15.08/ 7.09)	VDMWAVGcifAELL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22100 with CDK8 domain of Kingdom Viridiplantae
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