<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22091

Description Uncharacterized protein
SequenceMAAKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFNDNSVQSDIKLWPFEVIDGPGGKPLIGVSYMGEKKQFAAEEVSSMVLTKMKEIAEAFLGVTLKNAVITVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKASSVGEKNVMIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRMVHHFVQEFKRKHKKDISGSARALRRLRTACERAKRTLSSTAQTTIEIDSLFEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKQSVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAIAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERSRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGSKNKITITNDKGRLSKEEIEKMVQDAEKYKAADEEHKKKVESKNSLENYAYNMRNTIRDEKIASKLDAADKETIEKAVESAVEWLDHNQLAEADEFEDKMKELESVCNPIIARMYGAGGGAGGPDMPGGFGGRDEPPSSAGGPGPKIEEVD
Length653
PositionUnknown
OrganismChara braunii (Braun's stonewort)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Charophyceae> Charales> Characeae> Chara.
Aromaticity0.06
Grand average of hydropathy-0.391
Instability index36.98
Isoelectric point5.21
Molecular weight71323.95
Publications
PubMed=30007417

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22091
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     207.81|      51|     189|     157|     218|       1
---------------------------------------------------------------------------
  157-  207 (83.15/44.09)	SQR.....QATKDAGVISGLNVMRIINEPTAAAIAYGLDKKASSV.GEKNVM.IFDLG
  346-  397 (59.81/28.26)	STRipkvqQLLQD..FFNGKELCKSIN.PD.EAIAYGAAVQAAILsGEGNEK.VQDL.
  423-  468 (64.85/38.16)	NTT.....IPTKKEQVFSTYS....DNQPGVLIQVY..EGERSRT.RDNNLLgKFELS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.38|      18|      21|      38|      55|       2
---------------------------------------------------------------------------
   16-   33 (19.08/10.98)	....TTYSCVGVWQHDRveIIA
   38-   55 (32.67/24.21)	NR..TTPSYVAFTDTER..LIG
   60-   78 (24.63/16.39)	NQvaMNPTNTIF.DAKR..LIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.53|      17|      60|     527|     544|       4
---------------------------------------------------------------------------
  528-  544 (29.01/14.09)	AEKYKAADEEH.KKKVES
  565-  582 (22.52/ 9.08)	ASKLDAADKETiEKAVES
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.02|      24|     397|     102|     127|       6
---------------------------------------------------------------------------
  102-  127 (35.43/33.77)	GGKPLIGVSymGEKKQFAAEEVSSMV
  502-  525 (39.60/28.70)	GSKNKITIT..NDKGRLSKEEIEKMV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22091 with Med37 domain of Kingdom Viridiplantae
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