<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22089

Description Uncharacterized protein
SequenceMAAKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFNDSSVQSDIKLWPFEVIDGPGGKPLIGVSYMGERKQFAAEEVSSMVLTKMKEIAEAFLGATVKNAVITVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKASSVGEKNVMIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRMVHHFVQEFKRKHKKDISGSARALRRLRTACERAKRTLSSTAQTTIEIDSLFEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKQSVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAIAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERSRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGSKNKITITNDKGRLSKEEIEKMVQDAEKYKAADEEHKKKVESKNSLENYAYNMRNTIRDEKIASKLDAADKETIEKAVDSAVEWLDQNQLAEADEFEDKMKELEGVCNPIIARMYGAGGGAGGGMGADMPGGGFGGRDAPPSSAGGPGPKIEEVD
Length657
PositionUnknown
OrganismChara braunii (Braun's stonewort)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Charophyceae> Charales> Characeae> Chara.
Aromaticity0.06
Grand average of hydropathy-0.374
Instability index36.84
Isoelectric point5.21
Molecular weight71448.07
Publications
PubMed=30007417

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22089
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     269.67|     100|     287|     153|     323|       1
---------------------------------------------------------------------------
   84-  218 (133.18/159.31)	SSVQSDIKLWP.FEVIDgpggkpligvsYMGE..RKQFaaEEVSSMVLTK.MKEIaeaflgatvknavitvpaYFNDSQRQATKDAGVI...................SGLNVMRIINePTaAAIAYGLDKKASSV.GEKNVMIFDLggGTFDVSLLTI
  282-  407 (136.49/72.34)	STAQTTIEIDSlFEGID...........FYSTitRARF..EELNMDLFRKcMEPV................ekCLRDAKMDKQSVHEVVlvggstripkvqqllqdffNGKELCKSIN.PD.EAIAYGAAVQAAILsGEGNEKVQDL..LLLDVTPLSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.38|      18|      21|      38|      55|       2
---------------------------------------------------------------------------
   16-   33 (19.08/ 9.79)	....TTYSCVGVWQHDRveIIA
   38-   55 (32.67/21.53)	NR..TTPSYVAFTDTER..LIG
   60-   78 (24.63/14.59)	NQvaMNPTNTIF.DAKR..LIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.42|      17|      35|     528|     544|       5
---------------------------------------------------------------------------
  528-  544 (29.21/15.17)	AEKYKAADEEH.KKKVES
  565-  582 (22.21/10.15)	ASKLDAADKETiEKAVDS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22089 with Med37 domain of Kingdom Viridiplantae
Unable to open file!