<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22077

Description Uncharacterized protein
SequenceMAQPQTGPPGGQPGHGPGPGPGPGPGINMNAGPVPVPGTMGPMSLASHPGALPPFSPSVQFSHPAQPPFNTAHLRPMGAPPPRFAPPPGPPPQGPPPSGMGPPLPGPPLPAGGPPRPPPLGVPPPGGPPCGPMPGRSPLAGSGPRHGIPSGPPHGPPGNPLGPGHIPPGNPLGPGNVHCPGSLTTFPPLVPLGPHMGPPPGSLPGPPPTAPPGPPPNAPPGIPLGVPGPPGVPAGLGAPLGPPHGIPPRFPLGPPPGPPPGIPGAPPGPPPAAGPPGPPPGVPLGPPSTVPLHGPPPLRPLGPPLGVPPGPPGAPPGPPCAPSGPPGGGRPADPNLANGGMPPGVHPPASAATPHATPQMLSPHSSAGASRDSPAASAATPSSDPSAPPIPSSPNFALHATSGGPPGVPTDSPSGTRGVQSTTPPGLPHAGQHRQFPGAPPSSTPGMPPGAPHGMNGPSDSQLRNQSGSVPSNLSLPSHRALPNAAPTDPSAASAGASPKTALHTSSGAPSCASPKSSPGAGGAPAQTPPGGPVPPPGTPGASPRPGPAPCAPASPRTDAVVKGHGAVPAGPPGAAPGVPTGMPHPTATTAITDAVPTSTIAGSTSCPTNPPSDASNTALAAAQTAGPTTVPRSGPSTDAAIAASQKSSGGPPSSVPSSPVKAREISSGDGHSGTTDAVTRAVGGVSESTPTGPGPTSSALPDGSAPGPGSSPADPARPPGQPQPQQSQESQPSLELQPSQQNQPPHQQEQQQQAQQTHPGASSTQAGLLGPGLRPISPAAPPGLPQFLSQLPAGLRPFIPGAGFIGPGMTQLAHLVPAGHMQGPLPHPQGAQITHFHGGGGFRLPPPPGSMGFNIVVQGATGQPPGSSPMVQVGPMSLPQLAQLRPPLQFLQPIHIAGMMRPGEQMTRPSAPLPSGPPPAALPGSMAPWGSPQMQILLPQMHMQQQLQAQAPQSQQQQHSDTQLQAQGQLQQVAQMQQSQAQTQGGQQMLQAGLTAPGTQLSPLAGSMSMTLHPPGAVPHQQHKQQLQPGGKAMGPVPGYHQMPGAQGAVPGLPSTSNLNPNHPPLAPVPVPSNVLIQRVKTSLAAAGIQQQPSLMGLPPGVTGTWTMVQGPVLGPIAVQPAKTGSQEGGPTTAGGTAGGKDAGPAADGPVGKRDDEGSEKKTVGGEMADAKVDAQGDSEMKDADTAGKEGGKDKEEKAKENKDKDKEVEAKKSNPDIEESWTAHKSADGTIYYYNSITGESTYERPKGFTGQPEKVAAQPTPVAWERLTGTDWALVTTNDGKKYYYNIKTQATSWQVPPEVTELKLKAELEKAKAAGDASHGGSGASKGMSLPAAVTGGREAIGAKALSAASSALDLVKKKLADSSATATPGVASVETSTVGPGTANGASAGGGTEAKTAEGDSKAAPSGEKGTKAESDGSSSESSSDSDEEEDNLSKEECANRFKEMLKEKGVAPFSKWDKELPKIIFDPRFKAIASHSERRSLFDHYVRTRADEERREKRAALKAAMDGFKQLLNEAEGEISHSTEYETFAEKWGEDPRFLALEKKDRETLLNERVLPLKKAEEERVKAEKDAAIAAFKELLNEKKEIVTSTARWSKTKDSLRDDPRYKALPRAEREAIFRAHVAALLAAEQEAERIAKAKKEEEEKQKARERELRKRKEREEEEMERARVKIRRKEAVVAFQALLVERVKDPEASWLEYKAKLEKDSSDGREDIMDIEVTEREQMFKEYLVVLNEKCEREYMQLLSEELSYDLAIRLDRDGKTIFNSWTEARKVLKTDLRYQRFPRKDRESFYRKYIEDLHRRLRRGATNDGGPGDMTAREEGEIGNGTGRSPLSRHHPSTRSSPRHGYHLRSPSPPHSHRHGHGNRR
Length1873
PositionUnknown
OrganismChara braunii (Braun's stonewort)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Charophyceae> Charales> Characeae> Chara.
Aromaticity0.03
Grand average of hydropathy-0.684
Instability index60.69
Isoelectric point8.65
Molecular weight192474.68
Publications
PubMed=30007417

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22077
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             9|     753.15|      61|      61|     187|     247|       2
---------------------------------------------------------------------------
   67-  123 (61.87/ 6.51)	PPFntAHLRP.MgappprfapppgpppqGP.....PPSGM...................G......PP.............L..PG..PP.LPAG..GPPR...PPP.....LGVP
  124-  183 (93.22/14.69)	PP.....GGPPC................GP.....MPGRSPlagsGPRHGIP......SG.......P..PHG.P..PGNPLG.PGhiPPGNPLG.PGNVH...CP.......GSL
  187-  247 (139.36/26.72)	PPL..VPLGPHM................GP.....PPGSLP....GPPPTAP......PG......PP..PNA.P..PGIPLGVPG..PPGVPAG.LGAPL...GPP.....HGIP
  251-  294 (78.00/10.72)	P......LGPPP................GP.....PPG.IP....G....AP......PG......PP..PAAgP..PG.P.......PPGVP.......L...GPPstvplHG..
  296-  346 (91.14/14.15)	PPL..RPLGPPL................GV.....PPG.........PPGAP......PG......PPcaPSG.P..PG..GGRPA..DPNLANG.........GMP.....PGVH
  347-  409 (68.87/ 8.34)	PPA..SAATPHA................TP..qmlSPHSSA....GASRDSPaasaatPS......SD..PSA.P..P.....IPS..SPNF..A.LHATS...GGP.....PGVP
  526-  584 (82.99/12.02)	AQT..PPGGP..................VP.....PPGT.P....GASPR........PG......PA..PCA.PasPRTDAVVKG..HGAVPAGpPGAAP...GVP.....TGMP
  687-  742 (62.91/ 6.79)	SES..TPTGP..................GPtssalPDGSAP....G.PGSSP..............AD..PAR.P..PGQPQPQQS..QESQPSL....EL...QPS.....QQ..
  814-  880 (74.79/ 9.88)	AHL..VPAGHMQ................GP.....LPHP.Q....GAQITHF......HGgggfrlPP..PPG.S..MGFNIVVQG..ATGQPPG..SSPMvqvG.P.....MSLP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      76.69|      15|      15|    1636|    1650|       6
---------------------------------------------------------------------------
 1607- 1622 (15.83/ 7.79)	RDD.PRYkALPRAEREA
 1636- 1650 (24.00/16.64)	QEA.ERI.AKAKKEEEE
 1652- 1667 (17.65/ 9.77)	QKArERE.LRKRKEREE
 1668- 1681 (19.20/11.45)	EEM.ER..ARVKIRRKE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      97.14|      19|      20|    1140|    1158|       7
---------------------------------------------------------------------------
 1111- 1129 (21.41/ 6.05)	QGPVLGPIAVQPAKTGSQE
 1130- 1148 (29.87/12.17)	GGPTTAGGTAGGKDAGPAA
 1211- 1229 (24.05/ 7.96)	EAKKSNPDIEESWTAHKSA
 1394- 1412 (21.80/ 6.34)	GGGTEAKTAEGDSKAAPSG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     326.66|      59|     236|     751|     810|       9
---------------------------------------------------------------------------
  751-  809 (113.26/39.15)	QQQQAQ.QTHPGASSTQAGLLGPGLRPISPAA........P.PG..LP..QFL..SQL.PAG..L..RPF.IPGAGFIGPG
  888-  940 (79.29/23.55)	PLQFLQ.PIHI......AGMMRPGEQMTRPSA........PlPS..GP..P.P..AAL.PGS..M..APWgSPQMQILLP.
  976- 1046 (77.04/20.89)	QMQQSQaQTQGGQQMLQAGLTAPGTQ.LSPLAgsmsmtlhP.PG.aVPhqQHK..QQLqPGGkaM..GP..VPGYHQM.PG
 1048- 1102 (57.08/12.39)	.....Q.GAVPGLPSTSN..LNPNHPPLAPVP........V.PSnvLI..QRVktSLA.AAG..IqqQPS.LMG...LPPG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.45|      13|      15|    1541|    1553|      10
---------------------------------------------------------------------------
 1541- 1553 (22.24/18.09)	DPRFLALEKKDRE
 1557- 1569 (21.21/16.79)	NERVLPLKKAEEE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.14|      17|      66|    1504|    1520|      11
---------------------------------------------------------------------------
 1504- 1520 (29.34/21.03)	RAALKAAMDGFKQLLNE
 1572- 1588 (27.81/19.53)	KAEKDAAIAAFKELLNE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.38|      14|      15|    1324|    1337|      12
---------------------------------------------------------------------------
 1324- 1337 (25.19/11.31)	GGSGASKGMSLPAA
 1340- 1353 (23.19/ 9.77)	GGREAIGAKALSAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     138.22|      37|     236|    1173|    1209|      13
---------------------------------------------------------------------------
 1150- 1168 (19.64/ 7.10)	................GPVGKRDDE..GSEKKTVGGE
 1173- 1209 (60.52/40.67)	KVDAQGDSEMKDADTAGKEGGKDKEEKAKENKDKDKE
 1417- 1453 (58.05/38.64)	KAESDGSSSESSSDSDEEEDNLSKEECANRFKEMLKE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.57|      18|      18|     602|     619|      14
---------------------------------------------------------------------------
  602-  619 (33.64/10.66)	AGSTSCPTN.PPSDASNTA
  622-  640 (26.93/ 6.74)	AAQTAGPTTvPRSGPSTDA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     109.18|      23|      50|    1230|    1252|      15
---------------------------------------------------------------------------
 1230- 1252 (41.47/28.25)	D........GTIYYYNSITGESTYERPKGFT
 1253- 1273 (33.94/21.33)	G........QPEKVAAQPTP.VAWERLTG.T
 1274- 1304 (33.76/21.16)	DwalvttndGKKYYYNIKTQATSWQVPPEVT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.50|      14|      15|    1471|    1485|      16
---------------------------------------------------------------------------
 1471- 1485 (20.85/19.06)	FDPRFKAIASHsERR
 1488- 1501 (24.64/16.45)	FDHYVRTRADE.ERR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     167.59|      28|      44|     412|     439|      17
---------------------------------------------------------------------------
  412-  439 (53.49/17.13)	SPSGTRGVQSTTPPGLPHAGQHRQFPGA
  440-  458 (37.29/ 9.10)	PPSST.......P.GMPPGAPH.GMNGP
  459-  485 (41.42/11.15)	SDSQLRN.QSGSVPSNLSLPSHRALPNA
  505-  524 (35.40/ 8.16)	TSSGAPSCAS..PKSSPGAG......GA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      55.44|      13|      16|    1723|    1735|      18
---------------------------------------------------------------------------
 1723- 1735 (22.18/14.46)	EVTERE..QMFKEYL
 1740- 1754 (15.25/ 7.79)	EKCEREymQLLSEEL
 1772- 1784 (18.01/10.44)	SWTEAR..KVLKTDL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.93|      11|      15|      27|      37|      21
---------------------------------------------------------------------------
   27-   37 (20.43/10.22)	INMNAGPVPVP
   43-   53 (19.50/ 9.24)	MSLASHPGALP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.61|      13|      17|     642|     654|      22
---------------------------------------------------------------------------
  642-  654 (22.48/ 8.27)	IAASQKSSGGPPS
  661-  673 (21.13/ 7.30)	VKAREISSGDGHS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22077 with Med35 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GPGMTQLAHLVPAGHMQGPLPHPQGAQITHFHGGGGFRLPPPPGSMGFNIVVQGATGQPPGSSPMVQVGPMSLP
2) MAQPQTGPPGGQPGHGPGPGPGPGPGINMNAGPVPVPGTMGPMSLASHPGALPPFSPSVQFSHPAQPPFNTAHLRPMGAPPPRFAPPPGPPPQGPPPSGMGPPLPGPPLPAGGPPRPPPLGVPPPGGPPCGPMPGRSPLAGSGPRHGIPSGPPHGPPGNPLGPGHIPPGNPLGPGNVHCPGSLTTFPPLVPLGPHMGPPPGSLPGPPPTAPPGPPPNAPPGIPLGVPGPPGVPAGLGAPLGPPHGIPPRFPLGPPPGPPPGIPGAPPGPPPAAGPPGPPPGVPLGPPSTVPLHGPPPLRPLGPPLGVPPGPPGAPPGPPCAPSGPPGGGRPADPNLANGGMPPGVHPPASAATPHATPQMLSPHSSAGASRDSPAASAATPSSDPSAPPIPSSPNFALHATSGGPPGVPTDSPSGTRGVQSTTPPGLPHAGQHRQFPGAPPSSTPGMPPGAPHGMNGPSDSQLRNQSGSVPSNLSLPSHRALPNAAPTDPSAASAGASPKTALHTSSGAPSCASPKSSPGAGGAPAQTPPGGPVPPPGTPGASPRPGPAPCAPASPRTDAVVKGHGAVPAGPPGAAPGVPTGMPHPTATTAITDAVPTSTIAGSTSCPTNPPSDASNTALAAAQTAGPTTVPRSGPSTDAAIAASQKSSGGPPSSVPSSPVKAREISSGDGHSGTTDAVTRAVGGVSESTPTGPGPTSSALPDGSAPGPGSSPADPARPPGQPQPQQSQESQPSLELQPSQQNQPPHQQEQQQQAQQTHPGASSTQAGLLGPGLRPISPAAPPGLPQFLSQLPA
3) QPIHIAGMMRPGEQMTRPSAPLPSGPPPAALPGSMAPWGSPQMQILLPQMHMQQQLQAQAPQSQQQQHSDTQLQAQGQLQQVAQMQQSQAQTQGGQQMLQAGLTAPGTQLSPLAGSMSMTLHPPGAVPHQQHKQQLQPGGKAMGPVPGYHQMPGAQGAVPGLPSTSNLNPNHPPLAPVPVPSNVLIQ
4) RLRRGATNDGGPGDMTAREEGEIGNGTGRSPLSRHHPSTRSSPRHGYHLRSPSPPHSHRHGHGNRR
5) SATATPGVASVETSTVGPGTANGASAGGGTEAKTAEGDSKAAPSGEKGTKAESDGSSSESSSDSDEEEDNLSKEECANRF
6) VKTSLAAAGIQQQPSLMGLPPGVTGTWTMVQGPVLGPIAVQPAKTGSQEGGPTTAGGTAGGKDAGPAADGPVGKRDDEGSEKKTVGGEMADAKVDAQGDSEMKDADTAGKEGGKDKEEKAKENKDKDKEVEAKKSNPDIEESWTAHK
7) VPPEVTELKLKAELEKAKAAGDASHGGSGASKGMSLPAAVTGGREAI
807
1
893
1808
1368
1081
1299
880
794
1079
1873
1447
1227
1345










Molecular Recognition Features






MoRF SequenceStartStop




1) FYRKYI
2) GKKYYYNIK
3) GTIYYYNSIT
4) LDLVKKKL
5) LKAEL
6) LPKIIFDPRFKAI
1797
1283
1231
1357
1308
1466
1802
1291
1240
1364
1312
1478