<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22077

Description Uncharacterized protein
SequenceMAQPQTGPPGGQPGHGPGPGPGPGPGINMNAGPVPVPGTMGPMSLASHPGALPPFSPSVQFSHPAQPPFNTAHLRPMGAPPPRFAPPPGPPPQGPPPSGMGPPLPGPPLPAGGPPRPPPLGVPPPGGPPCGPMPGRSPLAGSGPRHGIPSGPPHGPPGNPLGPGHIPPGNPLGPGNVHCPGSLTTFPPLVPLGPHMGPPPGSLPGPPPTAPPGPPPNAPPGIPLGVPGPPGVPAGLGAPLGPPHGIPPRFPLGPPPGPPPGIPGAPPGPPPAAGPPGPPPGVPLGPPSTVPLHGPPPLRPLGPPLGVPPGPPGAPPGPPCAPSGPPGGGRPADPNLANGGMPPGVHPPASAATPHATPQMLSPHSSAGASRDSPAASAATPSSDPSAPPIPSSPNFALHATSGGPPGVPTDSPSGTRGVQSTTPPGLPHAGQHRQFPGAPPSSTPGMPPGAPHGMNGPSDSQLRNQSGSVPSNLSLPSHRALPNAAPTDPSAASAGASPKTALHTSSGAPSCASPKSSPGAGGAPAQTPPGGPVPPPGTPGASPRPGPAPCAPASPRTDAVVKGHGAVPAGPPGAAPGVPTGMPHPTATTAITDAVPTSTIAGSTSCPTNPPSDASNTALAAAQTAGPTTVPRSGPSTDAAIAASQKSSGGPPSSVPSSPVKAREISSGDGHSGTTDAVTRAVGGVSESTPTGPGPTSSALPDGSAPGPGSSPADPARPPGQPQPQQSQESQPSLELQPSQQNQPPHQQEQQQQAQQTHPGASSTQAGLLGPGLRPISPAAPPGLPQFLSQLPAGLRPFIPGAGFIGPGMTQLAHLVPAGHMQGPLPHPQGAQITHFHGGGGFRLPPPPGSMGFNIVVQGATGQPPGSSPMVQVGPMSLPQLAQLRPPLQFLQPIHIAGMMRPGEQMTRPSAPLPSGPPPAALPGSMAPWGSPQMQILLPQMHMQQQLQAQAPQSQQQQHSDTQLQAQGQLQQVAQMQQSQAQTQGGQQMLQAGLTAPGTQLSPLAGSMSMTLHPPGAVPHQQHKQQLQPGGKAMGPVPGYHQMPGAQGAVPGLPSTSNLNPNHPPLAPVPVPSNVLIQRVKTSLAAAGIQQQPSLMGLPPGVTGTWTMVQGPVLGPIAVQPAKTGSQEGGPTTAGGTAGGKDAGPAADGPVGKRDDEGSEKKTVGGEMADAKVDAQGDSEMKDADTAGKEGGKDKEEKAKENKDKDKEVEAKKSNPDIEESWTAHKSADGTIYYYNSITGESTYERPKGFTGQPEKVAAQPTPVAWERLTGTDWALVTTNDGKKYYYNIKTQATSWQVPPEVTELKLKAELEKAKAAGDASHGGSGASKGMSLPAAVTGGREAIGAKALSAASSALDLVKKKLADSSATATPGVASVETSTVGPGTANGASAGGGTEAKTAEGDSKAAPSGEKGTKAESDGSSSESSSDSDEEEDNLSKEECANRFKEMLKEKGVAPFSKWDKELPKIIFDPRFKAIASHSERRSLFDHYVRTRADEERREKRAALKAAMDGFKQLLNEAEGEISHSTEYETFAEKWGEDPRFLALEKKDRETLLNERVLPLKKAEEERVKAEKDAAIAAFKELLNEKKEIVTSTARWSKTKDSLRDDPRYKALPRAEREAIFRAHVAALLAAEQEAERIAKAKKEEEEKQKARERELRKRKEREEEEMERARVKIRRKEAVVAFQALLVERVKDPEASWLEYKAKLEKDSSDGREDIMDIEVTEREQMFKEYLVVLNEKCEREYMQLLSEELSYDLAIRLDRDGKTIFNSWTEARKVLKTDLRYQRFPRKDRESFYRKYIEDLHRRLRRGATNDGGPGDMTAREEGEIGNGTGRSPLSRHHPSTRSSPRHGYHLRSPSPPHSHRHGHGNRR
Length1873
PositionUnknown
OrganismChara braunii (Braun's stonewort)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Charophyceae> Charales> Characeae> Chara.
Aromaticity0.03
Grand average of hydropathy-0.684
Instability index60.69
Isoelectric point8.65
Molecular weight192474.68
Publications
PubMed=30007417

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22077
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             9|     753.15|      61|      61|     187|     247|       2
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   67-  123 (61.87/ 6.51)	PPFntAHLRP.MgappprfapppgpppqGP.....PPSGM...................G......PP.............L..PG..PP.LPAG..GPPR...PPP.....LGVP
  124-  183 (93.22/14.69)	PP.....GGPPC................GP.....MPGRSPlagsGPRHGIP......SG.......P..PHG.P..PGNPLG.PGhiPPGNPLG.PGNVH...CP.......GSL
  187-  247 (139.36/26.72)	PPL..VPLGPHM................GP.....PPGSLP....GPPPTAP......PG......PP..PNA.P..PGIPLGVPG..PPGVPAG.LGAPL...GPP.....HGIP
  251-  294 (78.00/10.72)	P......LGPPP................GP.....PPG.IP....G....AP......PG......PP..PAAgP..PG.P.......PPGVP.......L...GPPstvplHG..
  296-  346 (91.14/14.15)	PPL..RPLGPPL................GV.....PPG.........PPGAP......PG......PPcaPSG.P..PG..GGRPA..DPNLANG.........GMP.....PGVH
  347-  409 (68.87/ 8.34)	PPA..SAATPHA................TP..qmlSPHSSA....GASRDSPaasaatPS......SD..PSA.P..P.....IPS..SPNF..A.LHATS...GGP.....PGVP
  526-  584 (82.99/12.02)	AQT..PPGGP..................VP.....PPGT.P....GASPR........PG......PA..PCA.PasPRTDAVVKG..HGAVPAGpPGAAP...GVP.....TGMP
  687-  742 (62.91/ 6.79)	SES..TPTGP..................GPtssalPDGSAP....G.PGSSP..............AD..PAR.P..PGQPQPQQS..QESQPSL....EL...QPS.....QQ..
  814-  880 (74.79/ 9.88)	AHL..VPAGHMQ................GP.....LPHP.Q....GAQITHF......HGgggfrlPP..PPG.S..MGFNIVVQG..ATGQPPG..SSPMvqvG.P.....MSLP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      76.69|      15|      15|    1636|    1650|       6
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 1607- 1622 (15.83/ 7.79)	RDD.PRYkALPRAEREA
 1636- 1650 (24.00/16.64)	QEA.ERI.AKAKKEEEE
 1652- 1667 (17.65/ 9.77)	QKArERE.LRKRKEREE
 1668- 1681 (19.20/11.45)	EEM.ER..ARVKIRRKE
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      97.14|      19|      20|    1140|    1158|       7
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 1111- 1129 (21.41/ 6.05)	QGPVLGPIAVQPAKTGSQE
 1130- 1148 (29.87/12.17)	GGPTTAGGTAGGKDAGPAA
 1211- 1229 (24.05/ 7.96)	EAKKSNPDIEESWTAHKSA
 1394- 1412 (21.80/ 6.34)	GGGTEAKTAEGDSKAAPSG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     326.66|      59|     236|     751|     810|       9
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  751-  809 (113.26/39.15)	QQQQAQ.QTHPGASSTQAGLLGPGLRPISPAA........P.PG..LP..QFL..SQL.PAG..L..RPF.IPGAGFIGPG
  888-  940 (79.29/23.55)	PLQFLQ.PIHI......AGMMRPGEQMTRPSA........PlPS..GP..P.P..AAL.PGS..M..APWgSPQMQILLP.
  976- 1046 (77.04/20.89)	QMQQSQaQTQGGQQMLQAGLTAPGTQ.LSPLAgsmsmtlhP.PG.aVPhqQHK..QQLqPGGkaM..GP..VPGYHQM.PG
 1048- 1102 (57.08/12.39)	.....Q.GAVPGLPSTSN..LNPNHPPLAPVP........V.PSnvLI..QRVktSLA.AAG..IqqQPS.LMG...LPPG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.45|      13|      15|    1541|    1553|      10
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 1541- 1553 (22.24/18.09)	DPRFLALEKKDRE
 1557- 1569 (21.21/16.79)	NERVLPLKKAEEE
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.14|      17|      66|    1504|    1520|      11
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 1504- 1520 (29.34/21.03)	RAALKAAMDGFKQLLNE
 1572- 1588 (27.81/19.53)	KAEKDAAIAAFKELLNE
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.38|      14|      15|    1324|    1337|      12
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 1324- 1337 (25.19/11.31)	GGSGASKGMSLPAA
 1340- 1353 (23.19/ 9.77)	GGREAIGAKALSAA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     138.22|      37|     236|    1173|    1209|      13
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 1150- 1168 (19.64/ 7.10)	................GPVGKRDDE..GSEKKTVGGE
 1173- 1209 (60.52/40.67)	KVDAQGDSEMKDADTAGKEGGKDKEEKAKENKDKDKE
 1417- 1453 (58.05/38.64)	KAESDGSSSESSSDSDEEEDNLSKEECANRFKEMLKE
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.57|      18|      18|     602|     619|      14
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  602-  619 (33.64/10.66)	AGSTSCPTN.PPSDASNTA
  622-  640 (26.93/ 6.74)	AAQTAGPTTvPRSGPSTDA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     109.18|      23|      50|    1230|    1252|      15
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 1230- 1252 (41.47/28.25)	D........GTIYYYNSITGESTYERPKGFT
 1253- 1273 (33.94/21.33)	G........QPEKVAAQPTP.VAWERLTG.T
 1274- 1304 (33.76/21.16)	DwalvttndGKKYYYNIKTQATSWQVPPEVT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.50|      14|      15|    1471|    1485|      16
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 1471- 1485 (20.85/19.06)	FDPRFKAIASHsERR
 1488- 1501 (24.64/16.45)	FDHYVRTRADE.ERR
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     167.59|      28|      44|     412|     439|      17
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  412-  439 (53.49/17.13)	SPSGTRGVQSTTPPGLPHAGQHRQFPGA
  440-  458 (37.29/ 9.10)	PPSST.......P.GMPPGAPH.GMNGP
  459-  485 (41.42/11.15)	SDSQLRN.QSGSVPSNLSLPSHRALPNA
  505-  524 (35.40/ 8.16)	TSSGAPSCAS..PKSSPGAG......GA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      55.44|      13|      16|    1723|    1735|      18
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 1723- 1735 (22.18/14.46)	EVTERE..QMFKEYL
 1740- 1754 (15.25/ 7.79)	EKCEREymQLLSEEL
 1772- 1784 (18.01/10.44)	SWTEAR..KVLKTDL
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.93|      11|      15|      27|      37|      21
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   27-   37 (20.43/10.22)	INMNAGPVPVP
   43-   53 (19.50/ 9.24)	MSLASHPGALP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.61|      13|      17|     642|     654|      22
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  642-  654 (22.48/ 8.27)	IAASQKSSGGPPS
  661-  673 (21.13/ 7.30)	VKAREISSGDGHS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22077 with Med35 domain of Kingdom Viridiplantae
Unable to open file!