<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21981
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MDLAYICEWEKWPKSTHCPSVPLACTWSCRNLIAFTTDLRSDDQDLTRMIHILDTEHPWDVHSIRSEHSEAITCLEWDQSGSRLLSADADGQIKCWSMADHLANSWESPVGSLVEGDPIVALSWLHNGVKLALHVEKSGASSFGEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSASPVQFYKVCVSVVNEKCRIDTEILPSLFMRCTTDLNRRDRLPAITHLKFLARDMSEQVLLCASSQTSSVVECWSLRKEGLPVNNIFQQLSPAVGDKQPTILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVASDTQFYPGLGLALAFHDGSVHIVHRLSLQTMAIFYSSAAPRSVDEPAIKRPRTTGPAVHFKAMQLSWTSLALVGIDNHGRLSMLRISPSMGHSLDAGLALRHLLFLLEYCMVTGYDWWDILLHVQPNMVQSLVEKLHEEYTRQKAELQQVLSTRILAMKASLCKLSPCAVTRVCEYHAKLFLIAASSTLKSLLRPHVLNTPDKSPGDRLTEICAKITDVDIDKVMINLKTEEFVLDMNTLQALQQLLQWVGDFVLYLLASLPNQGSPLRPGHSFLRDGMSLGLLRELMVVIRIWGLLKPGCLPVYTATSDTQDSMSLLFRLLTKLWICCRDEGPTSEPDEALVDECCLLPSQLLIPSLDWLPVSDGLVSRLQPKQPLRLHFGKPPALPGSATSLQLDGLIRVPGQPKMDHLRRLHLGAYPTEACKACTRCGCVTMLKSPNKTTAVKQWEQRWIKNCLCGGLWWRMPLSYP |
Length | 829 |
Position | Tail |
Organism | Balaenoptera acutorostrata scammoni (North Pacific minke whale) (Balaenoptera davidsoni) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Laurasiatheria> Artiodactyla> Whippomorpha> Cetacea> Mysticeti>
Balaenopteridae> Balaenoptera.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.022 |
Instability index | 49.57 |
Isoelectric point | 7.89 |
Molecular weight | 91946.87 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | catalytic activity GO:0003824 IEA:InterPro
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP21981
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 147.60| 48| 183| 419| 476| 1
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419- 476 (72.31/59.34) FKAMQ..LSWTS....LALVGIDNHGrlSMLRisPsmGHS.LDAGLALRhllfLLEYCMVTGYDW
599- 653 (75.29/38.25) LQALQqlLQWVGdfvlYLLASLPNQG..SPLR..P..GHSfLRDGMSLG....LLRELMVVIRIW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 158.84| 51| 188| 65| 119| 2
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65- 118 (91.35/63.34) RSEHSEAITCLEW...DQSGSRLL..SADADGQIKCWSMADH...LANSWE..SP.VGslvEGDP
261- 322 (67.49/36.16) RRDRLPAITHLKFlarDMSEQVLLcaSSQTSSVVECWSLRKEglpVNNIFQqlSPaVG...DKQP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 141.40| 45| 579| 119| 178| 6
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119- 178 (69.37/72.33) IVALSWLHNGVKLAlhveksgassfgekfSRVKFSPSLTLFGGKP..MEG.WIAVTVSGLVTV
714- 761 (72.02/46.20) IPSLDWLPVSDGLV...............SRLQPKQPLRLHFGKPpaLPGsATSLQLDGLIRV
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