<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21967

Description Uncharacterized protein
SequenceMAREAPAIGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPRNTVFDAKRLIGRHFSEPLVQEDMRHWSFTVKPGPGDKPFIEVQYKNEAKTFSPEEISSMVLIKMKETAQAFIGQDKVVKKAVVTVPAYFNDSQRQATKDAGTIAGLEVLRIINEPTAAAIAYGLDKKTQGAQGEKNVLIFDLGGGTFDVSLLSIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKNKKDISDNPRSLRRLRTACERAKRTLSSAAQTSIELDSLYEGIDFYSTITRARFEELCMDLFRKCMDPVEKVLKDSKIDKASVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILTGEGGEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTFADNQPGVLIQVYEGERARTRDNNLLGKFELSGIPPAPRGVPQINVVFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIERMVQEAEKYKAEDEAARGKVEAKNGLENYAYNMRNTIRDDKVASKLEAEDKEKIEKKVQEVIEWLEANQLAEVEEFEHQQKELEGVCNPIISRMYGAAGAGGMPGGMPDMGGMGGGDPSSAGRGGPTVEEVD
Length655
PositionUnknown
OrganismTetradesmus obliquus (Green alga) (Acutodesmus obliquus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Chlorophyta> core chlorophytes> Chlorophyceae> CS clade> Sphaeropleales> Scenedesmaceae> Tetradesmus.
Aromaticity0.06
Grand average of hydropathy-0.433
Instability index32.11
Isoelectric point5.15
Molecular weight71862.44
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
ATPase activity	GO:0016887	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21967
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      77.72|      19|      75|     342|     360|       1
---------------------------------------------------------------------------
  342-  360 (33.77/23.65)	VLVGGSTRIP.KVQQLLQDF
  386-  399 (16.74/ 7.81)	ILTGEGG..E.KVQDLL...
  419-  438 (27.21/17.54)	VLIPRNTTIPtKKEQVFSTF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     162.99|      53|      75|     449|     505|       2
---------------------------------------------------------------------------
  449-  505 (81.22/58.48)	VYEGERARTRDNNLLGKFEL.SGIPPAPRGVPqiNVVFDIDANGILNvsAEDKTTGQK
  526-  579 (81.77/48.02)	VQEAEKYKAEDEAARGKVEAkNGLENYAYNMR..NTIRDDKVASKLE..AEDKEKIEK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      75.77|      18|      21|      36|      53|       3
---------------------------------------------------------------------------
   14-   31 (18.49/ 9.21)	....TTYSCVGVWQNDRveIIA
   36-   53 (32.65/21.40)	NR..TTPSYVAFTDTER..LIG
   58-   76 (24.62/14.48)	NQvaMNPRNTVF.DAKR..LIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.68|      17|     190|     170|     188|       4
---------------------------------------------------------------------------
  170-  188 (22.03/29.42)	GLEVLRIINePTaAAIAYG
  363-  379 (32.65/27.97)	GKELCKSIN.PD.EAVAYG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      33.67|      10|      18|     107|     116|       5
---------------------------------------------------------------------------
  107-  116 (17.08/12.12)	VQYKNEAKTF
  127-  136 (16.60/11.56)	IKMKETAQAF
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21967 with Med37 domain of Kingdom Viridiplantae
Unable to open file!