<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21966

Description Uncharacterized protein
SequenceMGNAPSSAVLQAVHNGDVQAVRIAIQEHPTQIDDTEPTHGWTPLHVASVRGYDVIVRELLARCAAPNLVDKEGRTPLHLAAAEGHAIVVKDLLRRGGDPLRKDEAGKLPLELAQEQQHVITAGLLADAMAGRGVSTPTATGSPAAWQARGQAQQDVPVAGGAGVRVLVPDFANLGVTPTGGGGAYPNLPMPLPGAPAAAYDNSWLSQLPVPPGVSISAPSAPPAPGAGQQQQQQQQQQQQQQQQLPPGAPAVSALPDYYSYIRPLPAEPHQAEATQPAAAAGYGGGAYPALPGAAPAAPAYSSQPQQQQWPQQQQWPQQQQQEQGWPPAGMAPPATAGQQQWQQPQQQAPGMQQPGTQPPVMPAAAAAAAPVGGGAADDDDDDGGWGAQDDDDWGGGAERPSVSTTTTAGGGPASRPGSKAGGPDLNAAVGAAVTGASKVVGAVGKSAVAGAKQFLGGLIPKPPGKGGRDSPVPSVAADMPGATFGGPAGRLYSYDELARATQGFAAANRLGCGGYGPVFRGVLDGVPVAVKLLDTSGLSSQGPKEFAAEVAILSRLHHPHIVLLIGSCPERCGLVYELLDNGSLEQHLFSSSMPDLAWQDRIRIACETVSALVFLHSAPEPIIHMDLKPGNLLLNRSLLCKVGDVGLSRLMPGAPGRSQLEAAAGGPHVPPQSTMLDSRLVGTPSYMDPEYLRTGRFGPKSDTYSLGVILLQMLTGKDAGRVVSVVEAALARCQGDPASFATIIDPRSGNWPITEAASFAHLAMRCVELSRGNRPDLRSDVLPALLQLAERAALYDSARAVKRSVSLSSSGQPPSMFICPITQDVMDDPVFAADGYTYEREAIAGWTMHHSTSPMTNLPLAHTGLTPNLGLRSAIREWQDKQGARRA
Length888
PositionTail
OrganismTetradesmus obliquus (Green alga) (Acutodesmus obliquus)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Chlorophyta> core chlorophytes> Chlorophyceae> CS clade> Sphaeropleales> Scenedesmaceae> Tetradesmus.
Aromaticity0.05
Grand average of hydropathy-0.254
Instability index52.92
Isoelectric point5.70
Molecular weight92185.67
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21966
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     253.56|      31|      31|     307|     337|       1
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  195-  229 (37.64/ 9.85)	APAA..AY.DNSWLSQLPVPP.........GVsisaP..SA..PPAPGA.....GQ
  230-  254 (47.04/14.32)	QQQ....Q.QQQ.QQQQQQQQ..........L....P..P...G.APAV.....SA
  258-  300 (29.72/ 6.09)	YYSYirPL.PAE.PHQAEATQpaaaagyggGA....Y..PAlpGAAPAA.....PA
  307-  337 (69.36/24.93)	QQQW..PQ.QQQWPQQQQQEQ.........GW....P..PA..GMAPPA.....TA
  339-  377 (37.25/ 9.67)	QQQW..QQpQQQAPGMQQPGT.........QP....PvmPA..AAAAAApvgggAA
  378-  409 (32.55/ 7.43)	DDD...DD.DGGWGAQDDDD...........W....G...G..GAERPSvstttTA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     119.46|      25|      31|      42|      66|       2
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   42-   66 (44.20/35.17)	TPLHVASVRGYDVIVRELLARCAAP
   75-   99 (43.03/33.99)	TPLHLAAAEGHAIVVKDLLRRGGDP
  108-  130 (32.23/23.08)	LPLELAQEQQH.VITAGLLADAMA.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     287.43|      85|     191|     456|     548|       3
---------------------------------------------------------------------------
  410-  455 (36.73/ 8.04)	.......................................................GGGPASRPG..SKAG..GPDLNAAV.GAAVtgA..SKVVGAVGKSAvAG.AKQF.
  456-  548 (141.01/69.17)	LGGLIPKPPGKGGRDSP.....VPSVAADMPGATFGGPagrlySY..DELARatqGFAAANRLG..CGGY..GPVFRGVLDGVPV..A..VKLLDTSGLSS.QG.PKEFA
  648-  742 (109.69/42.94)	LSRLMPGAPGRSQLEAAaggphVPPQSTMLDSRLVGTP.....SYmdPEYLR.......TGRFGpkSDTYslGVILLQMLTGKDA..GrvVSVVEAALARC.QGdPASFA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     237.19|      62|     670|     132|     194|       4
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  132-  194 (105.75/52.33)	RGVSTpTATGSPAAWQARGQAQ..QDVPVAGGAGVRVLVPDFANLGVTPTG.GGGAYPNLPMP.LPG
  753-  785 (29.20/ 8.14)	...........................PITEAAS.......FAHLAMRCVElSRGNRPDLRSDvLPA
  804-  865 (102.24/46.78)	RSVSL.SSSGQPPSMFICPITQdvMDDPVFAADGYTYEREAIA..GWTMHH.STSPMTNLPLA.HTG
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21966 with Med32 domain of Kingdom Viridiplantae
Unable to open file!