<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21919

Description U-box domain-containing protein 35 (Fragment)
SequenceMKEAVVDDSDIGKGLLEFANRNVIHSIVLGASVKNPLSSLKKFKPYQYQDIPTTMIKSAPDYCSVYIISKLKIVSARSAVRSMAKSSIPVPRQLSVQACEIEGGSLVNNFGLALATNRGQPPRIRGSYEGPEAIRIQARERPRSAGNSMLIDNMDVPARPRHWSMDERDIAGLGVFDVTKRDPDVSDSLGTSLAPQSSKELEAEMQRLRLELKQTMDMYSSACKQAISAKNQAEQIRQWKMEEERKVEEVRLSQEAALALAEKEKARAKAAMEAAEEARKRAELEAQRRKNAEMKARKEAEEKDRALTALAQNDNRYRKYTIEEIEIATEKFSPSNKIGEGGYGPVFKGQLDHTPVAIKILRPNANQGRKQFQQEVEVLSCIRHPHMVLLLGACPEHGCLVYEYMDNGSLEDRLYRKNNSRPISWSKRFEIAAEIGTALLFLHQNKPEPIVHRDLKPSNILLDRNYVSKISDVGLARLVPPSVADSVTQYYMTSAAGTFCYIDPEYQQTGMLTTMSDIYSLGIMLLQIITAKPPMGLTHQVRKAIEKGNFEEVLDPVVTDWPVEEAKSFAKLALDCAELSKKDRPNLATVVLPELNRLREFGFTLHNKPRSFSCDDLVSNSYASRPPTPPPSHYSDVEAFFRN
Length643
PositionTail
OrganismMucuna pruriens (Velvet bean) (Dolichos pruriens)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Fabales> Fabaceae> Papilionoideae> 50 kb inversion clade> NPAAA clade> indigoferoid/millettioid clade> Phaseoleae> Mucuna.
Aromaticity0.06
Grand average of hydropathy-0.487
Instability index45.48
Isoelectric point8.49
Molecular weight72142.63
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21919
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     119.41|      39|      40|     200|     238|       1
---------------------------------------------------------------------------
  200-  238 (62.76/48.48)	ELEAEMQRLRLELKQTMDMYSSACKQAISAKNQAEQIRQ
  242-  280 (56.65/42.96)	EEERKVEEVRLSQEAALALAEKEKARAKAAMEAAEEARK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     103.09|      32|     156|       7|      39|       2
---------------------------------------------------------------------------
    7-   39 (51.02/50.02)	DDSDI.GKGLLEFANRNVIHSIVLGASVkNPLSS
  166-  198 (52.08/44.95)	DERDIaGLGVFDVTKRDPDVSDSLGTSL.APQSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.92|      12|      17|     134|     149|       3
---------------------------------------------------------------------------
  134-  149 (12.52/17.48)	IRIQARerPRSAgnSM
  154-  165 (26.40/14.72)	MDVPAR..PRHW..SM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     137.83|      46|     441|      45|     106|       4
---------------------------------------------------------------------------
   45-  106 (57.83/91.29)	PyQYQDipTTMIKSAPDYCSVYIIsKLKIVSARsavrsmakssiPvPRQLSVQACE.IEGGSL
  504-  550 (80.00/62.44)	P.EYQQ..TGMLTTMSDIYSLGIM.LLQIITAK...........P.PMGLTHQVRKaIEKGNF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.13|      22|      48|     306|     327|       5
---------------------------------------------------------------------------
  306-  327 (36.67/24.97)	ALTALAQNDNRYRKYTIEEIEI
  357-  378 (37.45/25.65)	AIKILRPNANQGRKQFQQEVEV
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21919 with Med32 domain of Kingdom Viridiplantae
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