<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21866

Description Uncharacterized protein
SequenceMAAKADSSAYPSLNYMQIQAHQSLNTWGSPYCRKHVVLSYRKYDPPPPSPPPSPPPSTSGSCSLPSSSGSHSPSLSGSASGSRSLWYLGPPSSTSGSRAVYLALAVALGLAVLVLQLALAGLGLALTLHRARHPRPRAHAPPRSPSYLGPPSSTSGSRAVYLALAVALGLALEAKSDNEGRNEEYNEDDESEDGDGEDGNEGDNDSDDADDNDDDDDDNDDDNDDDDNDDDEGDDDDDDESDDNDNEGRVTTTATTTTMWTTTTMWTTAAM
Length271
PositionKinase
OrganismPolyporus brumalis
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Agaricomycotina> Agaricomycetes> Polyporales> Polyporaceae> Polyporus.
Aromaticity0.05
Grand average of hydropathy-0.849
Instability index52.08
Isoelectric point4.05
Molecular weight28670.02
Publications
PubMed=30061923

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21866
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     121.30|      29|      58|      83|     111|       1
---------------------------------------------------------------------------
   83-  111 (61.12/24.52)	RSLWYLGPPSSTSGSRAVYLALAVALGLA
  143-  171 (60.18/24.06)	RSPSYLGPPSSTSGSRAVYLALAVALGLA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      78.77|      15|      15|     210|     224|       2
---------------------------------------------------------------------------
  177-  191 (26.15/ 8.78)	DNEGRNEEYNE.DDES
  214-  229 (27.05/ 9.28)	DDDDDNDDDNDdDDND
  230-  245 (25.56/ 8.45)	DDEGDDDDDDEsDDND
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.08|      11|      15|      53|      63|       4
---------------------------------------------------------------------------
   53-   63 (23.93/12.19)	SPPPSTSGSCS
   70-   80 (21.14/ 9.94)	SHSPSLSGSAS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21866 with Med13 domain of Kingdom Fungi
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