<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21846

Description Uncharacterized protein
SequenceMTSNPTLGIQPPQQRAPPNATHHSRTSSQASRGTVGSARNPGLSVASSGGQRGVGTSDNGSGRPSPATSNIDSPNRSANGARGGRQPNTTEAYHPHGTASERQPVAQIGFPPRPGLNAPQREQPPSSAVIGPIITSKSTVKSASFEPPTASLLYPGGKPADYHPWTDNHIEDNLTEQTVKSGFLNKPPVTNETNTARPGLWQFFKNKPGLNTLSSLFVTVLEKRQALGRLIGPSTFKPPPRVVLTTTKRDAWLAELANPAFPLRRLNRTIPYGINGKILLEQCLGKEIPTARAVWLTKCIGSNELRGLKRKVVTGAPGISGELKWIREWTMHVEQFVDATINSCGGESWKEKMQYVLRLVFHLFSEQLLDQEHYLDWILSAFETSNAERMPMWLVHIQLYWNFLVTNRKRGRRLAEGLCAHLDAGLATEDNDLLLPARQRMELLVANLAVSHRGCLILPKTWNRYERVLQSIAKRSSNSAVREALRAIAKRNNRLSKPSWEQESKSPSSSRRQAFAALDAVGLDFSVNHTASNLSDLFDSAQDIVPILLQWSSTIYRHGPHRMYVAARVLRRLKAMGVDLEMGVLEFLTSLPKTSAIDESKIARVVAELVRSRHFAVGRLLQSMIARDLVSGSDQDSPHAQRLIQLVLGIPTHDLPRHVVDLRQIILDNSGLKAGQIDHGDIMELVQDAISEAMSAAPALRFDLKGNLARLDSMDLSGKLAISLWLRQEILDRMNATKDAMSYSPSTQSSFVWAFYVARDLLERFEDFSILADVVGICIPHDHVEVLTSVTDTIYHNSHCFAAIGALKPLSAQVVERYQSLRTEMPLERSYLQSVADLCISVGDQSNIIPQLNHDIARCDQRNAMAICSPASDNAVDMLNTTPMESDEEIERILSSGTTMDEQSMSRVFIRLTARLLERPTDCGGHCGRWFSRLRSFDETNFDGLMRQWVTSTIGGVPVESYRQIFPSLVGSSCLSLSTIIQIADERVQSTSPDDSITRGLEAAVLYALLPFGDGELPATIPEVYKYRLEQRKVGHQSRDIILKHVSCAIALSGGENTGDVSKALQRMLLAPETASFLRDAAVHAGQALFRELDLSSKSTMPTAGVLRTLLVSLLDPTGELGLSALPPRQELAQLVQIVDDLSLPFCQIEAQYLLRAGSASNREATEKLASVLFDAILPAQDGDRPVWLGLIEFLDKTVLFRLRTLAEGRILKLASEQLAGSRTKEDSDQIKHSRSLLRKLLCVVDCTFAAAPTQPLTENANVVTETLGLIRDILSANQLPTNETETEGTLQAKPTNHGVCPYFTALLHLLAVHKKAGVAAKTGTYDSAPVLSVLLALLHHSWLEAYPMTVELVCDVSAQFADDLPDEMRVHLLRSEILKYKDDSRIAFLLGPVQQTEGWLGLVTTNTAPSIPQAGTPTTSAARFGASQPQMNARAQLPARPQPPAQRPGGQAGQQKSYNPPIPFPLRRWELLPDQGSTTGGNDTSISLSLFGARKV
Length1497
PositionKinase
OrganismVenturia inaequalis (Apple scab fungus)
KingdomFungi
Lineage
Aromaticity0.06
Grand average of hydropathy-0.227
Instability index49.36
Isoelectric point8.00
Molecular weight164424.53
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21846
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     446.64|     152|     166|     963|    1127|       1
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  963- 1127 (228.95/236.25)	RQIFPSLVG.SSCLSLsTIIQIADE...RVQSTSPDDSiTRGLeAAVLY.ALLPFGDGELP...ATIPEVYKYRLEQRKVGHQSRdiILKHVSCAIALS.GGENTGDV..SKALQRMLLAPETASFlrdaAVHAGQALFRELDLSSKstmpTAGVLRTLLVSLLDPTGEL...G.LSALP
 1129- 1295 (217.69/180.08)	RQELAQLVQiVDDLSL.PFCQIEAQyllRAGSASNREA.TEKL.ASVLFdAILPAQDGDRPvwlGLIEFLDKTVLFRLRTLAEGR..ILKLASEQLAGSrTKEDSDQIkhSRSLLRKLLCVVDCTF....AAAPTQPLTENANVVTE....TLGLIRDILSANQLPTNETeteGtLQAKP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      82.57|      16|      48|      63|      78|       2
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   63-   78 (25.52/13.35)	RPSPATSNIDSPNRSA
   85-   99 (26.45/14.18)	R.QPNTTEAYHPHGTA
  113-  128 (30.60/17.92)	RPGLNAPQREQPPSSA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     118.33|      27|     161|     155|     181|       7
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  155-  181 (50.28/33.37)	PG..GK..PADYHPWTDNHIEDNLTEQTVKS
  285-  311 (28.97/15.88)	....GKeiPTARAVWLTKCIGSNELRGLKRK
  317-  343 (39.09/24.19)	PGisGE..LKWIREWT.MHVE.QFVDATINS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21846 with Med12 domain of Kingdom Fungi
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