Description | Mediator of RNA polymerase II transcription subunit 13 |
Sequence | MDTAEYDTNTVLINNIASIAFRVYESPSDTSSHSFASAALEVENTLRRDGHVVFYDGARRGLWHFQILAQDQINSNNLNATLDLCGHELVLVEEGILEPASLQKTRSQQQQPVQTPTSSRSSSSALDQSQRSGLLPLAPPGNPSTSQEQDPSGVEPKPTTSSYRLVYENFITALLLSISCAFCRRTGAIPLNYRTLLLLSETLEVGNPLDSCPQQCPIAGTLKAYVTTTGVLVVSFALSRCRGLSSLAELVSCTLPRSGTPVLAAPFGVVASIHLSPAGEPGTASIAQTPITQALSLRVVSDGEDSLWKQACLKILKLRGVISSVVADCAWVNLSVPRPRLQDVKSEAKRQQPSSSTVTIPWPSPLCFRKKTVDLPCTSRVGDMLRSGFEESHDPLSSAKGWFNSAADREQKVSKRKAERALALKETQILEARAPKPSSPSPAAVRRPSAAAGSTIYPTPPDGIQHHNGVTPSMDGTLSSPGNTLPAAPSSDFLTSTVGDAMDMSDESKRQRADNNLLGEADDTFGEMGGDMFGDHDITEADFSFFDEQPGDMDLDTAMDAATLPTEAVVGAEEAASQCQATNVPARDDAVFAKPELRHARSSCMDITPGQRGRETRSAPMKREASPFDPHTVFKRLRASLATTTGGRNVKGQTSSRGQRVFDTMKVDASLIRSINKKYEQGGLFDYTKMANLEKPKVQQATLPETDYLKRHGKQRKRSWNGQFKAETFMKGLMGSEPSGLQAKVDSEDEDSSASSDDADSSYSAEEPMSPVKSSIKMMPVEDDVASQVTSVRDGDPMEEPDQHLAAELPRLSKPDFPELPLSLLFLDPEPLSLELCLADDDFIQVAQLLTDQAATGLLDMFSGQEGGAAVGTNLDSPTLTTCARNSVQVLRELMPTLLKGAAPANLKGFLDVADVPLLGQPTRLQQRPVVPGRDPGTESLRPSNLYQIPGPHLEVRRSETKLSVLPSAVLFWESLGLAPSSGGKDVNAVCVFPGWSGMADNVKAFLGCLKSVYEMLKLGSFERLALPAGLEAGALPYEVDRISTSPGAAVTGALAESMETLLSAVSSADTPAANMVVYFVYSPNMPASIMEACIAFQRLASSYQIKTSTITATTAPTTTTTTTTTTTTTTTTTSTAATPKSPTTQSEVVLQLVSAKLVSSPTCVVVTPAPELVRLSMETYDRCAGKAMPSPAIRLEQPLPRIIDFKLTVSPSASLMRENSCIHIAYAQSVDDRWITAAWTDDRGNQQETASYCLGRKGRPPSRSISDVAKDMWELTVDLISMWKVHWRVVITKCSPMDQQEMDFWADRARTEVKASVTMILMTVDTNPSLQLLPPAVKLSMMTTTTTTTPPTAETTTTTTAATSTVSPDQTETESEAVLSDVTDQTWGAVVSHRFNVSLSALDMRSSSLASGYLIKRTGSRAEDAPVLMEVNLVHADASPRSYEPLLREMLSYFRGLGTLARARGVVQREVDVRPWHVAAAEKAVRALYLLM |
Length | 1493 |
Position | Kinase |
Organism | Ophiocordyceps sp. 'camponoti-leonardi' |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Hypocreales> Ophiocordycipitaceae> Ophiocordyceps. |
Aromaticity | 0.05 |
Grand average of hydropathy | -0.253 |
Instability index | 49.87 |
Isoelectric point | 5.29 |
Molecular weight | 161030.30 |
Publications |
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 RuleBase:RU364134 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP21751 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 45.25| 11| 25| 1108| 1119| 1 --------------------------------------------------------------------------- 1116- 1126 (23.33/ 6.73) APTTTTTTTTT 1350- 1360 (21.91/10.59) TPPTAETTTTT --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 57.02| 16| 18| 520| 537| 2 --------------------------------------------------------------------------- 520- 537 (28.73/25.96) EAD.DTFGEMGGDMfgDHD 540- 556 (28.28/17.20) EADfSFFDEQPGDM..DLD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 459.77| 155| 224| 950| 1173| 3 --------------------------------------------------------------------------- 950- 1154 (220.44/244.91) PGPHLEV.....RRSETKLSVLPSAVLFWESlGLAPSSGGKDVNAVCVFPGWSGMADNvkaflgclksvyemlklgsferlalpaglEAGALPYEVDRISTSPGAAVTGALAESMETLLSAVSSADTPAanMVVYFVYSP...............NMPASI......MEACIAFQRLASSyqIKTSTItattaptttttttttTTTTTT.............TTSTaATPKSPTTQSEVVLQLV 1190- 1383 (239.33/150.86) PSPAIRLeqplpRIIDFKLTVSPSASLMREN.SCIHIAYAQSVDDRWITAAWTDDRGN.............................QQETASYCLGRKGRPPSRSISDVAKDMWELTVDLISMWKVHW..RVVITKCSPmdqqemdfwadrartEVKASVtmilmtVDTNPSLQLLPPA..VKLSMM...............TTTTTTtpptaettttttaATST.VSPDQTETESEAVLSDV --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 212.92| 66| 222| 197| 266| 4 --------------------------------------------------------------------------- 197- 266 (101.38/52.23) LLLSET..LEVGNPLDSCPQqcPIAgtLKAYVTTTGVLVVSFALSRCRGLSSLAELVSCTLPRSGTPVLAAP 422- 489 (111.54/48.15) LALKETqiLEARAPKPSSPS..PAA..VRRPSAAAGSTIYPTPPDGIQHHNGVTPSMDGTLSSPGNTLPAAP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 82.04| 24| 33| 608| 640| 5 --------------------------------------------------------------------------- 608- 633 (39.96/35.67) TPGqrGRETRSAPMKREASPFDPHTV 644- 667 (42.08/17.55) TTG..GRNVKGQTSSRGQRVFDTMKV --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 103.13| 32| 224| 683| 721| 7 --------------------------------------------------------------------------- 676- 707 (55.77/44.91) NKKYEQGGLFD.YTKMANL..EKPKVQQATLPETD 715- 749 (47.36/23.03) QRKRSWNGQFKaETFMKGLmgSEPSGLQAKVDSED --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 57.27| 16| 631| 375| 390| 10 --------------------------------------------------------------------------- 375- 390 (31.48/21.49) LPCTSRVGDMLRSG.FE 1007- 1023 (25.80/16.21) LGCLKSVYEMLKLGsFE --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) HDITEADFSFF 2) TQILE 3) VFKRLRA | 536 427 633 | 546 431 639 |
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