<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21710

Description Uncharacterized protein
SequenceMPNAFVVISFSSFHLGKQPYPTIINLHLTVVAGLEMRTDAAMLFQEKVFVALPEESGESILCWVLEHASSSAEIIIMHVKRRQTGSLNHKVEHYEKCSNDLEEEHKTKHEQDGETAAKELSQSQHAPLDKYLNQCAKLVFKAKILMIEEWNVAEGILELVDRFWIRTLVMGAASDKHHSKEMKVPQSKKAIKLMENAHPFCEIWFVCDQKVIFSRSPSEDLRSVPVFVDADDNFWDIENNLDTEGYLLAQKKDHALVISEQADTAQNAEGTHEKGDTVILEDLHGSGDRVKEKQERLIEAMVPAQANAHREVELLHQQKQEMIIKSEVAELRERSEQLMIERDNAVSKIRTLEGQKKQMMTEWNFATKQVVELRKQKRLVTIERDSALGEMKTYHKKAKQAKTEIKELQEQKERMMTELNFARGKIVELHKQKRQVTTERGNVLGQMNIFQKKTEKAKTEVKELQGEIKRLKTELNCADGEVMELHEQKEQMHSRWDSAIGKCEELCGLMKQMLTELEKVAREVEALRKERHETITKLDHVVLQVAEARRQKVLMMAERDHALEEAKKLMSQLEQIMSERDSTVGDTVQLHEQAAQIIADNTMPSSQFTLVELQRATKDFNVNLKVGQGGFGVVYKGFLRNTTVAIKMLSSTGVQGQSDFKHEVTFMNTVRHPNVVTLVGACPEALALVYEFMPNGSLEGCLERVAGAPALSWQARTRIITEICSALSFLHKNTPYGIVHGDIKPANILLDGNLASKLCDFGTSRHLIHSDTAGSGMLCTSHPWGTPGYMDPEFHTTGVLTTRSDTYSFGVTILCVLTARSPLNLVRVVRDALERGDLRSVMDTSAGDWPIAQAKRLVRLALKCTEMTSDNRPDMAGEVWTVVKRLADEANGAAPTGQHGVGTSVQLNGQKLGIGMENPVYPCKCLSGIKIHSVAEAFKR
Length940
PositionTail
OrganismSetaria italica (Foxtail millet) (Panicum italicum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Panicodae> Paniceae> Cenchrinae> Setaria.
Aromaticity0.05
Grand average of hydropathy-0.404
Instability index43.40
Isoelectric point6.38
Molecular weight105819.22
Publications
PubMed=22580951

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21710
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     430.28|      55|      55|     355|     409|       1
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  293-  316 (20.77/ 8.39)	....................KQERLI........EAMVPAQANAHR...EVELLH
  317-  353 (52.64/34.09)	QQKQEM....IIKSEVAELRERSEQLMIERDNAVSKIRT..............LE
  355-  409 (97.05/69.89)	QKKQMMTEWNFATKQVVELRKQKRLVTIERDSALGEMKTYHKKAKQAKTEIKELQ
  411-  465 (88.77/63.22)	QKERMMTELNFARGKIVELHKQKRQVTTERGNVLGQMNIFQKKTEKAKTEVKELQ
  467-  521 (84.61/59.86)	EIKRLKTELNCADGEVMELHEQKEQMHSRWDSAIGKCEELCGLMKQMLTELEKVA
  530-  570 (57.74/38.20)	ERHETITKLDHVVLQVAEARRQKVLMMAERDHALEEA..............KKLM
  572-  596 (28.70/14.79)	QLEQIMSE.....................RDSTVGDTVQLHEQAAQ.........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     397.82|     122|     138|     653|     777|       2
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  653-  777 (204.23/166.79)	GVQGQSDFKHEVTFMNTVRHPNV...VT....LVGACPeaLAL...VYEFMPNGSLEGCLERVAGAPALSWQARTRIITEICSALSFLHKNTPYGIVHGDIKPANILLDGNLASKLCDFGTSRHLiHSDTAGSGM
  785-  916 (193.59/147.01)	GTPGYMDPEFHTTGVLTTRSDTYsfgVTilcvLTARSP..LNLvrvVRDALERGDLRSVMDTSAGDWPIAQAKRLVRLALKCTEMTSDNRPDMAGEVWTVVKRLADEANGAAPTGQHGVGTSVQL.NGQKLGIGM
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21710 with Med32 domain of Kingdom Viridiplantae
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