<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21709

Description Uncharacterized protein
SequenceMQGGPLSPEEYRAASPPALLHQPAPTIVVAIDRDRNSPLAAKWVVDHLLSSASHVILLHVAAHYPAATHGFALAETTQGALEAEMKEIFVPYRGFFNRNAQVEVSEVILEEADVSKAILGYITANKIQSIALGGACRNAFTKKFKNADVPSTLMKCAPDYCNIYVVAKGKSVNVRLAKCGVPAVTGTDVLPDNESLRGAVGLYSRRGSRGLLPPAMPDARRSVDSRSTLPELTSRPPFRERSLPSSAKHVMPAGKDYSDASSRSTRHESLAELDFGQSTRFSSIDFSENLDMSTTLAASPGGEPMSPATCQAQREVEAEMRRLRLELKQTMDMYNAACREAINAKQRAKEMQMLKLEDARRLEEAQHAEEAALAVAEMEKAKCRAAMEAAEAAQRLADLEAQRRRNAEVRARREADEKVRALDAITNHDFRYRRYHIDEIEMSTERFSDELKIGEGGYGPVYRASLDHTPVAIKVLRPDAHQGRKQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMDNGSLEDRLYRRGGTPPIPWSQRFRIAAEIATALLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPAVADSVTQYRLTATAGTFCYIDPEYQQTGKLGVKSDIYSLGVLLLQVVTARPPMGLTHHVEKAIDAGTFHQMLDITVKDWPVDEALGFAKLALKCTEIRRRDRPDLATVILPELNRLRNLGIAYDASVTAGPSYGSGDGGVQTTVSSPTVGGGGSSWKTAES
Length758
PositionTail
OrganismSetaria italica (Foxtail millet) (Panicum italicum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Panicodae> Paniceae> Cenchrinae> Setaria.
Aromaticity0.06
Grand average of hydropathy-0.328
Instability index51.32
Isoelectric point7.04
Molecular weight83313.90
Publications
PubMed=22580951

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21709
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     131.35|      33|      57|     318|     350|       1
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  292-  326 (42.86/26.28)	MSTT........LaaspggePMSPATCQ................AQREVEAEMRRL....RLE
  327-  363 (51.00/32.69)	LKQT........M.......DMYNAACREAINA...........KQRAKEMQMLKLedarRLE
  364-  414 (37.49/22.04)	EAQHaeeaalavA.......EMEKAKCRAAMEAaeaaqrladleAQRRRNAEV.RA....RRE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     114.89|      36|      59|      53|      91|       2
---------------------------------------------------------------------------
   53-   91 (54.62/36.35)	SHVILLHVAAHypaATHGFALAETTQGALEAEMKEIFVP
  115-  150 (60.27/32.35)	SKAILGYITAN...KIQSIALGGACRNAFTKKFKNADVP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.28|      16|      20|     208|     227|       3
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  208-  227 (23.96/22.14)	SRGLLPPAM..PDArrsvDSRS
  247-  264 (22.32/10.22)	AKHVMPAGKdySDA....SSRS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     176.57|      57|      60|     536|     594|       4
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  536-  594 (88.47/68.98)	PPIPWS.QRFRIAAEIATaLLFL...HQTKPEPLVHRDLKPANILLdRNYVSKISDVGLARLV
  596-  656 (88.10/59.37)	PAVADSvTQYRLTATAGT.FCYIdpeYQQTGKLGVKSDIYSLGVLL.LQVVTARPPMGLTHHV
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21709 with Med32 domain of Kingdom Viridiplantae
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