<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21708

Description Uncharacterized protein
SequenceMDVAVEEARRAKKAGNEAYGKSLLETAYQECVRDCDEAARRGRELRADNKLIAKALSRKASALLELAGCAGDYALAIRALQQSLAEHYSDETLDKLGKAESKMKELEEQERLDQAADHHRNESFKQKKYHEAAMHYTQAMKMNPNDPRIFSNRAQCYINLGALPQGLEDAEKCIELDPTFLKGYVRKAKVQFLLEDYENAMATYQEGLRCDPNNPEVLDGLRRSEAPIKTAHGGADLEYLKQMFEELWAEDIVHKFQKAMERAAKLKKEPSEECLRHTESERMRSFLSRTQQELERFKIQHDDVTKKLQMANEHNERLLGQLSESRGQYDWLLSEHDHLLHNRDRAVREVEGSRQKRVQMLSVLVTSMYSEFSTSELESASENFSSSLKIGEGGFACVYRGILRNMTVAIKVLKPDNLQGRSQFEQEVAILSRVRHPHLVTLLGACSESSTLVYEVLPNGSLEDFLVCADKRQALIWQIRIRIIAEICSALIFLHKNKPHPVVHGDLKPANILLDVNLVSKLSDFGISRFLIQSSTNNTTLYHTMHPAGTPLYMDPEFLATGELTPHSDVYSFGIVVLRLLTGKPPVGIKKVVEDAMMKGELQSVVDSSAGEWPDVLVQQLAHLALSCTELSRRCRPDLSGEVWRVVHAMRDAASIPSASSSRPVSDENCTPLYFICPISQDIMNDPHIAADGFTYEAEAIRSWLDSGHDMSPMTNMRLEQSELIPNRALRIAIQRWLQQQNMTL
Length745
PositionTail
OrganismSetaria italica (Foxtail millet) (Panicum italicum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Panicodae> Paniceae> Cenchrinae> Setaria.
Aromaticity0.06
Grand average of hydropathy-0.439
Instability index50.47
Isoelectric point5.97
Molecular weight84278.03
Publications
PubMed=22580951

Function

Annotated function 
GO - Cellular Component
plastid	GO:0009536	IEA:UniProtKB-KW
thylakoid	GO:0009579	IEA:UniProtKB-KW

GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21708
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.83|      24|      30|      80|     104|       1
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   80-  104 (35.11/26.80)	LQQSlAEHYSDETLDKLGKAESKMK
  112-  135 (42.72/28.21)	LDQA.ADHHRNESFKQKKYHEAAMH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.47|      17|     178|      17|      36|       2
---------------------------------------------------------------------------
   17-   36 (24.11/25.53)	EAYGKSLleTAYQECVRdCD
  195-  211 (33.36/21.23)	EDYENAM..ATYQEGLR.CD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      94.64|      31|      32|     257|     288|       4
---------------------------------------------------------------------------
  257-  288 (47.80/40.63)	QKAMERaAKLKKEPSEECLR..HTESERMRSFLS
  291-  323 (46.84/34.36)	QQELER.FKIQHDDVTKKLQmaNEHNERLLGQLS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21708 with Med32 domain of Kingdom Viridiplantae
Unable to open file!