<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21707

Description Uncharacterized protein
SequenceMGRSYHEGKDAAATDLGYPLVAVCIDKDKNSQNALKWAMDSLVHKGQTLVLVHVNTKGTSGGLEDAAGFKQPTDPHMKDLFIPFRCFCTRKDIHCKDVVLDEHDVAKAIIEFTAHAAVEKLVLGATARGGFVRFKADIPTTISKGAPDFCTVYVVNKGKVSSQRNAIRAAPRVSPLRSQILQAQAAAQQSQAAPRPEPPSSHRWSSSSRGSDHLETPRVDNFRSPFARGGTGNTRKSYADLSHMSMPDSADISFVSSAGRRSIDHHPVIPPRMSNSSADSYDHSFEMSRTPSKWGGDSFGGMDHTTFSQTSSSSFCSLGMDDVEAEMKRLRLELKQTMDMYSTACKEALTAKQKAMELQRWKMEEEQKTQDSRITEDSAMAMIEREKARAKAAMEAAEASQRIAEMEVQKRITAEKKLLKEAEDRKSRGGGGGMSHEVRYRRYSIEEIEQGTDRFNDARKVGEGGYGPVYKGFLDHTQVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMASGSLDDCLFRRGGGPVIPWQHRFRICAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSFGVMLLQIITAKPPMGLSHHVGRALERGALRDMLDPAVPDWPVEEAQCLAEMALRCCELRRKDRPDLGGVVLPELNRLRALGEDNMQYCGPIRGGGGGGMHSSPFYSNVSRSNAAEMMSDSSQYPRSVFSSRASDSPMPPRRSNA
Length788
PositionTail
OrganismSetaria italica (Foxtail millet) (Panicum italicum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Panicodae> Paniceae> Cenchrinae> Setaria.
Aromaticity0.07
Grand average of hydropathy-0.485
Instability index55.37
Isoelectric point8.42
Molecular weight86989.82
Publications
PubMed=22580951

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21707
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      86.28|      18|      44|     161|     178|       1
---------------------------------------------------------------------------
  161-  178 (31.72/19.50)	SSQRNAIR.AAPRVSPLRS
  186-  201 (27.82/16.11)	AAQQS..Q.AAPRPEPPSS
  206-  224 (26.73/15.15)	SSSRGSDHlETPRVDNFRS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      27.53|       7|     305|     305|     444|       2
---------------------------------------------------------------------------
  297-  303 (16.12/10.43)	DSFG..GMD
  313-  321 (11.41/156.40)	SSFCslGMD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      93.96|      27|      28|     407|     433|       3
---------------------------------------------------------------------------
  373-  394 (27.75/14.22)	.....RIT.EDSAMAMIERE..KAR..AKAAM
  407-  433 (44.37/27.00)	EVQ.KRITAEKKLLKEAEDR..KSR..GGGGG
  437-  465 (21.83/ 9.67)	EVRyRRYSIEE..IEQGTDRfnDARkvGEGG.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     223.96|      67|     195|     471|     543|       4
---------------------------------------------------------------------------
  471-  543 (112.38/90.21)	KGFL.DHTQVAIkvlrPDAAQGRSQFQQEVEVLSC.IRHPNMVLLLGAC.PEYGCLvyEYMASGSLDDCLFRRGGG
  670-  739 (111.58/74.19)	RGALrDMLDPAV....PDWPVEEAQCLAEMALRCCeLRRKDRPDLGGVVlPELNRL..RALGEDNMQYCGPIRGGG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.59|      24|      61|       5|      28|       5
---------------------------------------------------------------------------
    5-   28 (42.55/27.60)	YHEGKDAAATDLGYPLVAVCIDKD
   69-   92 (48.04/32.09)	FKQPTDPHMKDLFIPFRCFCTRKD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.73|      10|      30|     245|     254|       6
---------------------------------------------------------------------------
  245-  254 (19.84/14.14)	SMPDSADISF
  276-  285 (19.88/14.18)	SSADSYDHSF
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21707 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AMELQRWKMEEEQKTQDSRITEDSAMAMIEREKARAKAAMEAAEASQRIAEM
2) MHSSPFYSNVSRSNAAEMMSDSSQYPRSVFSSRASDSPMPPRRSNA
3) SADISFVSSAGRRSIDHHPVIPPRMSNSSADSYDHSFEMSRT
4) SQILQAQAAAQQSQAAPRPEPPSSHRWSSSSRGSDHLETPRVDNFRSPFARGGTGNTRKSYADLSH
355
743
249
178
406
788
290
243










Molecular Recognition Features






MoRF SequenceStartStop




NANANA