<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21705
Description |
Mediator of RNA polymerase II transcription subunit 7 |
Sequence | MLCLPSDWKYTVSTDLTDQNRHQVPVDFHPVPHSVRRGVTGVRRRPDAAVRCMVAMATSAYPPPPPFYRLYKDYEQDPSSAPEPPPPPPIDQIYTTFGTDRKTNELLPSLESHNLRQLYPNSPNIDFKKELRTLNRELQLHILELADILVERPSQYARRVEDISLIFSNLHHLLNSLRPHQARATLIHMLESQIQRRKQAIEDIKQRREEAQKLLGESLLILDGSQTN |
Length | 228 |
Position | Middle |
Organism | Setaria italica (Foxtail millet) (Panicum italicum) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade>
Panicoideae> Panicodae> Paniceae> Cenchrinae> Setaria.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.656 |
Instability index | 74.59 |
Isoelectric point | 7.85 |
Molecular weight | 26350.70 |
Publications | PubMed=22580951
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery.
ECO:0000256 RuleBase:RU364060
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP21705
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 76.16| 19| 22| 59| 77| 1
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59- 77 (40.91/20.39) SA..YPPPPPFYRLYKDYEQD
80- 100 (35.25/16.72) SApePPPPPPIDQIYTTFGTD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 43.21| 15| 27| 139| 158| 2
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139- 158 (13.72/29.07) QLHilELADILveRPSQyAR
169- 183 (29.49/21.93) NLH..HLLNSL..RPHQ.AR
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