<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21690

Description Uncharacterized protein
SequenceMKLARYPQMSESNANLRIESISHETFEQSHRSLLFDNFADDEAHSDSFSQAHSSHSASNVVTSSESSEHVASESSGTNATGTEGSKNYDSLSSLGGAPCATSNSSEECQSMDEVAKLRKELQDTLVVYDKACADLVNAKKKIQVLSTECSEEARKVEHALEWEEALKRTVADEKAKQLEATNQVEHARRSFTREAYSRHKAEMATNVLSQDRAQIVDAILSKSRTCRRYSKQDIELATENFSEARKIGEGGYGNVYRCTLDHTEVAVKVIQQDSIDKTDEFLKEVEILSQLRHPNLVLLLGFCPEIGCLVYEYLKNGSLEDQLFNNKGHQPLHWFLRIQIIFEVSCGLAFLHSRNPEPIVHRDLKPANILLDRSYVGKIGDVGFAKLISDLVPDWQTEYKETIVAGTLYYMDPEYQQTGTVRPKSDVFALGVIMLQLLTGRHPNGLIVSAENAIKNGRLHDILDKSQSDWPIDEAEMFANLGLKCTALKCRDRPDLESEVLLKLDEILHRITSSVNLRNPKLSVPSHFICPITQELMEDPHVAADGHTYEHYAIRAWLKRHKTSPVTRSKFPNSSIIPNHSLRAAIQQWKSQLPDQTKT
Length599
PositionTail
OrganismSetaria italica (Foxtail millet) (Panicum italicum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Panicodae> Paniceae> Cenchrinae> Setaria.
Aromaticity0.07
Grand average of hydropathy-0.493
Instability index48.37
Isoelectric point5.86
Molecular weight67390.05
Publications
PubMed=22580951

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21690
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     183.45|      61|     224|     277|     337|       1
---------------------------------------------------------------------------
  277-  299 (19.19/ 8.51)	..........................................KTDEFLK...................EVEILSQL..RHPNLVLL
  300-  372 (84.42/64.60)	LGFCPEIGCLVYEY...LKNGSLEDQL.FNNKGHQPLHWFLR.......iqiifevscglaflhsrnpEPIVHRDL..KPANILLD
  382-  444 (79.83/60.65)	VGFAKLISDLVPDWqteYKETIVAGTLyYMDPEYQQTGTVRPKSDVFAL...................GVIMLQLLtgRHPN....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      98.64|      30|      31|     183|     212|       2
---------------------------------------------------------------------------
  183-  212 (52.09/34.84)	QVEHA..RRSFTREAYSRHKAEMATNVLSQDR
  214-  245 (46.55/30.40)	QIVDAilSKSRTCRRYSKQDIELATENFSEAR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.52|      10|      19|      23|      32|       5
---------------------------------------------------------------------------
   23-   32 (19.63/13.31)	H.ETFEQSHRS
   44-   54 (14.89/ 8.28)	HsDSFSQAHSS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21690 with Med32 domain of Kingdom Viridiplantae
Unable to open file!