<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21689

Description Uncharacterized protein
SequenceMFASPFSVSSSHSAEHEAGARDSSIIVAVDRDKNSQQAAKWAVDKLLSRGSTLQLVHVRAEAGKDEGDAEITHLFISYRGYCARKGMHLKEVILDGNDISKEIIDYATSNAITDIVVGASTKNTFIRRFRNPDVPTCLMKMAPDYCTVHVIHKAKAIQVKAAKAPAPFSTLPPKQYSQPNIESDVSRASRGDWRKTSHTSSPVANRNSVDRLSAYAKAPSRDRPLSGARTAPQKDFDDYIDFIAPPRPSVTRSSFSDDIDLPMSMELPSIDFADSMELSSAMSMESLSYAGDVETEMRRLRLELKQTMEMYNSACKEAIDAKQKAAQMHQMKVEESKKFQELRNAEEEALALVQMEKAKCRAALEAAEAAQKIAELEAQKRLRAEWKAKREAEDRKKATDALNRNDLRYRRYSIDDIEAATHKFDKALKIGEGGYGPVYKAVLDHTNVAIKILRPDASQGRKQFQQEIEVLSCMRHPNMVLLLGACPEYGCLVYEYMDYGSLEDRLCRRGKTLPIPWSIRFRIAADIATGLLFLHQAKPEPLVHRDLKPANILLDHNFVSKISDVGLARLVPQSAADVTQYRMTSTAGTFCYIDPEYQQTGMLTTMSDIYSLGIMLLQIITARSPMGLTHHVENAIERGTFQEILDPMVTDWPVEEAMEFAKLALRCAELRKKDRPDLGKEILPELNRLRNLGHEYEAAQVSSASTNCSSSAPYSFGNDD
Length720
PositionTail
OrganismSetaria italica (Foxtail millet) (Panicum italicum)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Panicodae> Paniceae> Cenchrinae> Setaria.
Aromaticity0.07
Grand average of hydropathy-0.442
Instability index48.45
Isoelectric point6.56
Molecular weight80515.76
Publications
PubMed=22580951

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21689
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     145.66|      47|     337|     101|     149|       1
---------------------------------------------------------------------------
  101-  149 (75.93/71.64)	KEIIDYaTSNAITDIVVGAST.KNTFIRR......FRNPDVpTCLMKMAPDY.CTVH
  440-  494 (69.74/54.40)	KAVLDH.TNVAIKILRPDASQgRKQFQQEievlscMRHPNM.VLLLGACPEYgCLVY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.40|      16|      16|     255|     270|       2
---------------------------------------------------------------------------
  236-  250 (21.10/ 9.74)	FDDYIDFiaPPR...PSV
  255-  270 (29.88/16.65)	FSDDIDL..PMSMELPSI
  272-  287 (25.42/13.15)	FADSMEL..SSAMSMESL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     136.43|      47|     281|     368|     420|       5
---------------------------------------------------------------------------
  368-  420 (67.31/53.83)	EAAQKIAELEaqkrLR.AEWKAKREAEDRKKATDALNRndLRY..RRYSIDDIEAA
  655-  704 (69.12/40.58)	EEAMEFAKLA....LRcAELRKKDRPDLGKEILPELNR..LRNlgHEYEAAQVSSA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21689 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) FSTLPPKQYSQPNIESDVSRASRGDWRKTSHTSSPVANRNSVDRLSAYAKAPSRDRPLSGART
168
230










Molecular Recognition Features






MoRF SequenceStartStop




1) KDFDDYIDFIAP
234
245