<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21671
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MDQHANGSPNGKLEASSSSLIPDIPHITANILPLSNIIKFYTQEAYKQLTTAVENLSMNIEEESDIKRKKYFLDIIISLRQDFIKVYTLIKWASISKDVSKFIDLLNWFRLQEFQFENLMFQLNALTGYSGAKLPNSDIITALEVLYNGRPTLPSYNHIKIKNLSLGKILEVLEDLNLVLMTRFALMDIPKKFQYEIKDGRVYINVPNEYQVSITVGNDLIIDNKEDYYKSPFYFIDFKFLFGINPETAMITYHDDKVFTKLPSSLHAKLEKIANQVLLKEGLEGLYDLLHRYSTSFKIYLIAKQFKELFNTRWRNNFQINYQTGKSLIIVNYWSLHYLSKNWKSFLELGIDRNSNLSYRWFKNGQYSVDQELNKIFHIIPQDELNDINDDEVDEEPYSDDLNVDLILNVVVNKHAELLMTQIYQKLLEKFGDDEVSTVTPHQLLLQISPNKSTVFAINPLTGFFYFIDPTPVQNQITKKINLPPPITKPFVTEADMVSHIIDQITQLRLEVFNKEINNKLATTEWINNGIIKLGDYELSKLTNFLLDYEEVVGVTKVQFYRRKNWPSSWFLINMVSGLTTKSFWWVARIKSISGDWKIQWVQIIKFKEEDEENLLGVDPEELNYKFFNELSTFSSNMIIDHMVLEELNLRKVKFLKIKKGEKEVLEKFKLHVPGESKVDSNGGTSSLGVHYESMLLIHNHDLLPIYNSSSSLFLKIQLIGKNQMYLKLFGNLRNLKIKNSEEYELKLHLKIDEVNNFFQIDNTVNLLTVINESRNNLLDLIFNTLNKLNELIKILDQLNKNKITILDNDMDNITIKVSNDINNLVIKLPEQADHSIQLVSKDETPWEIQLVLKYLNQYLQEHRSSNILGIIKYLHEINPIINSEKLIADQIDSTNKTYMKLANGLNKLNFDLVFFNLNHLQFIYFINSNISNMKKIQKDKIIINISFKSLRFDDKKRKLIKVSLKDNLNPKNMKFKKLFEIMFKNINELIVNKGAKKPQPAAVTSTIEDDLINFDVDESEPEEEPKDEQQVFIKLNYDYLVTKDNFGPIMNEITKSFIQYLQE |
Length | 1064 |
Position | Tail |
Organism | Candida viswanathii |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes>
Saccharomycetales> Debaryomycetaceae> Candida/Lodderomyces clade> Candida.
|
Aromaticity | 0.11 |
Grand average of hydropathy | -0.288 |
Instability index | 31.00 |
Isoelectric point | 5.99 |
Molecular weight | 124203.47 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP21671
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
6| 396.94| 75| 130| 716| 790| 1
---------------------------------------------------------------------------
598- 641 (43.54/18.48) ...............KI.QWV...QI................IKFKEE...DEENL.L....GVDpeELNyKFF....................NELSTF..SSNMI.ID........
642- 712 (31.64/11.31) ........................HMVLEE.L.NLRKvkfLKIKKGEKevlEKFKLHVpgesKVD..SNG.GTS.....SLGvhyesmlliHNHDLLPIYNSSSS.............
716- 788 (114.36/61.12) ...............KI.QLIGKNQMYLKL.FGNLRN...LKIKNSEE...YELKLHL....KID..EVN.NFF.....QID.........NTVNLLTVINESRNNL.LDLIFNTLNK
789- 858 (83.68/42.65) LN..........eliKIlDQLNKNKITI.L.DNDMDN...ITIKVSND...IN.NLVI....KLP..E...........QAD.........HSIQLVSK.DETPWE..IQLVLKYLNQ
859- 920 (60.55/28.72) ..........................YLQ....EHRS...SNILGIIK...Y...LH.....EIN..PII.NSEkliadQID.........STNKTYMKLANGLNKLnFDLVFFNLNH
921- 989 (63.18/30.30) LQfiyfinsnisnmkKI.Q...KDKIIINIsFKSLR......FDDKKR...KLIKVSL....K..............................DN.LNPKNMKFKKL.FEIMFKNINE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 387.07| 103| 107| 153| 259| 2
---------------------------------------------------------------------------
153- 239 (137.16/76.54) ...........................................LPSYNHIKIKNLS....LGKILEVLEDLNLVLMTRFALM..DIPKKFQYEIKDGRVYINVPNEYQVSITVGNDLIIDNKEDYYK.SP....FYFIDFK
240- 344 (137.84/88.97) FL.FGINPETAMiTYhddKVF....................tkLPSSLHAKLEKIAnqvlLKEGLEGLYDLLHRYSTSFKIY..LIAKQFK.ELFNTRW....RNNFQINYQTGKSLIIVN...YWS.LH....YLSKNWK
346- 469 (112.07/61.96) FLeLGIDRNSNL.SY...RWFkngqysvdqelnkifhiipqdeLNDINDDEVDEEP....YSDDLNVDLILNVVVNKHAELLmtQIYQKLLEKFGDDEVSTVTPHQLLLQISP.......NKSTVFAiNPltgfFYFID..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.94| 15| 15| 78| 92| 3
---------------------------------------------------------------------------
78- 92 (26.84/17.56) SLRQDFIKVYTLIKW
94- 108 (26.10/16.85) SISKDVSKFIDLLNW
---------------------------------------------------------------------------
|