<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21579

Description Uncharacterized protein
SequenceMNNPSMQQNGMQQGRPSAGLHHFIQHYRVQQQQGKIPNGWQQTTPPEERGQLALQFFTQYRLLKPEIPEVESMRAALQFETQIFMSAQSKEQYVSQIKQKLIVMTTARQQQLQRLQAGVPNNMNNPINGMNPAQMNMMGQMGQQGPRQPTPQQFNPAFPNAQLQRPMQLSPVPMAQAQSSMGVNGPNPANMAQGQNNQQPNMQPNQNQQTRQDQLIINQFAKKLMDTCKEEVRVKFEADIRAWPDDKKQQLLNQGINPLFLRFRQHAEMLYRRGALNQPASAQNAGAMQGAAQQNRMQGQQMNMNQRQPNQEFDFTEIANRQMEAMRSQDQGTTVVPASNNPNNGAQMGGFQGQNPQPGQPQNAMAQRQAEAFHRQAQAQQAQAHAQAQAQAQAQARLEQQRQQQAAQARNQQNQLLQGQIGGLNLPQGSQQPSPAMPMLNRPMPPPGQPGPPGTPQQRPPQAHVPIMTPQPGQADPNLSELMRHAQQRAAAVQQANQQPLTDQARMSMMPPDLDASVKQQLLKVPEHQFRVILQSYMMNLRRNNGMPNGSFAPGQPIGGQPNMPFNQQQQLQPTMPGQMLGAPNMQNMVRPGMNLSQPPPGAGPQPPMGAQRASMPNQQQRVAAASNLLRANPGIIHATDPKPFPPNVLNAQIRQSLPPDVRTWQQLKAWAGQNPALVPGVDSQKLLMLQVLHFQDMVRQSNGVAGVHPTQQPGQGLAPPAQVNPNQGPVRTPQQQPNMQNMAALQVTPQELQQFRARMAGQPQANMPDDQLRGFMISMRMKNLQQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSAMLNQHAQQRNQGQPPVSMPPQQQQQQLQHSRPPTAQPPIQATPQSKPAPRPQQAQPTPSHPANNAGSKGTKRPNEDTNESGNEVAQQAPAMASSKSQPGLNLTQEQMSKLTPAQHAQYRAQLLKAQDTSNNRMQQQRASMLNPEELRQRMGDPTRIRQFKQLMDEAEKSLPHKQPIQLPPQARAALQKSLKEQFQRLKQLDQALRIFHASYDTSESEQVIRQIMNSRALLFQQINEADGTLHPQVTLTIDEFRNHMSMAVKFVIKIQEKMKQTQGQGTAAQQSQPQGSNASPAQLNAANLKIVEQQNRNQKAPSAPTTDRPPFAIGADPGHGAAHYFEGARPVTNLVLPEKKRAKLEAGSQSSTPAAKASPRIGSGMSNSPELRRQPPPDKQVPQRPTFRCNDASCEYSVRGFDSPAELESHSQMHVKVENPMQFALDSMADYLDVDQKTGEMKIDHNAAKRASKPAPAAPRAPPQNTKSEQTPGATQSAATPIAQQTTAMARVPTQTGVKDSPSSNLLKTPQTIAKVATPGSGARGKATPASIPKSVPKEQQVSAPEPAVKEEEQQQPPMLPMSLLDYSHEDTFAALDASRPFTVLDLKDEDNAWALRSRPASPSTTPESSAKDTPSTRQSDISENDNLLINIDLKDADMPDAWAVAMYGDTLPVDLHLSEDLQNLGVVLPPMDSEDMMLFPDYGAGTMMDLDMLEKTMDSMGGTLDASVLDA
Length1555
PositionTail
OrganismStemphylium lycopersici
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Dothideomycetes> Pleosporomycetidae> Pleosporales> Pleosporineae> Pleosporaceae> Stemphylium.
Aromaticity0.04
Grand average of hydropathy-0.934
Instability index62.48
Isoelectric point9.55
Molecular weight172131.66
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription, DNA-templated	GO:0006355	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21579
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      79.82|      26|      30|     837|     866|       3
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  125-  150 (33.18/ 6.13)	NPIN.GMNPAQMNMMGQMGQ.QGPRQPT
  838-  865 (46.63/14.30)	QQRNqGQPPVSMPPQQQQQQlQHSRPPT
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             9|    1153.04|     145|     146|     385|     529|       4
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    7-  102 (69.20/ 8.07)	............................................QQNGMQQ.GR..........................................P.SAGLH..HFIQH....YR.....VQQ....QQ.GkiP.NGWQQTTP......................PeergQLALQFFT..QY..RL.......LKPEIPEVesM......RAALQ...FETQIfmsAQSK.............EQYVS...................QIKQKL.I..............
  106-  219 (80.70/10.85)	.................................TARQ.......QQLQRLQaGV........PNNmnnpingmnpaqmnmmgqmgqqgprqptPQQF.NPAFPnaQLQRP....M..........................QLS......................P.......VPMAQA.QSsmGV.......NGPNPAN...M...............AQG.....QNN.............QQP...........NM.QPN.QNQQTRQDQ.LII.....N.....Q
  231-  375 (129.93/22.79)	EVR.VK.FEA.D.......IRAWPDDKKQQLLNQGINplflrfrQHAEMLY.RR..GAL.NQP.A............................SAQN.AGAM.....Q.............................GAAQQNR......................M....QGQQMNMNQrQP..NQefdfteiANRQM.EA..M......RSQDQ...GTTVV...PASNnpnngaqmggfqgQNPQPGQPQ...NAMA.QRQ.AEAF..............H.....R
  385-  529 (262.34/54.88)	HAQ.AQ.AQA.Q.......AQARLEQQRQQQAAQARN.......QQNQLLQ.GQ.IGGL.NLPQG............................SQQP.SPAMP..MLNRP....MP.....PPG....QP.G..P.PGTPQQRP......................P....QAHVPIMTP.QP..GQ.......ADPNLSEL..M......RHAQQ...RAAAV...QQAN.............QQPLTDQAR...MSMM.PPD.LDASVKQQL.LKVPE...H.....Q
  535-  663 (128.68/22.48)	....................QSYMMNLRRNNGM...........PNGSFAP.GQpIGGQpNMPFN............................QQQQlQPTMPgqMLGAPnmqnMV.....RPGmnlsQP....P.PGAGPQPP......................M....GAQRASM.P.NQ..QQ.......RVAAASNL..L......R...A...NPGII...HATD.............PKPF.............PPNvLNAQIRQSL...PPD...V.....R
  665-  784 (115.47/19.28)	WQQ.LK.AWAgQ.......NPALVPGVDSQ.................KLLM.LQ.V..L.HFQDM............................VRQS.NGVAG..V..HP....TQ.....QPG....QGlA..P.PA..QVNP......................N....QG..PVRTP.QQ............QPNMQNM..AalqvtpQELQQfraRMAGQ...PQAN..............MP.DDQLRgfmISMR.MKN..........................
  950- 1092 (124.39/21.44)	RAQlLK.AQD.T.......SNNRMQQQR....ASMLN.......PEE..LR.QR.MGD....PTR............................IRQF.KQLMD..EAEKS....LP.....HK.....QP.I..QlP..PQARA......................A...lQKSLKEQFQ.RL..KQ.......LDQALR....I......FHASY...DTSES...EQVI.............RQIMNSRAL...LFQQ.INE.ADGTLHPQVtLTIDEfrnHmsmavK
 1096- 1229 (118.46/20.00)	KIQ.EKmKQT.Q.......GQGTAAQQSQPQGSNASP.......AQ...LN.AA.NLKI.VEQQN............................RNQK.APSAP..TTDRP.....PfaigaDPG....HG.A..A.HYFEGARPvtnlvlpekkrakleagsqsstP....AAKA...SP.RI..GS.......GMSNSPEL..R......R.................................Q...............PPP..DKQVPQR.....P..........T
 1230- 1359 (123.87/21.32)	FRC.ND.ASC.EysvrgfdSPAELESHSQMH.VKVEN.......PMQFALD.SM.ADYL.DVDQK............................TGE.....MK..IDHNA....AK.....RAS....KP.A....PAAPRA.P......................P....QNTKSEQT...P..GA.......TQSAATPI...........AQQ...TTAMA...RVPT.............QTGVKDSPS...SNLLkTPQ.TIAKV....................
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     133.39|      32|      34|    1477|    1509|       5
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 1430- 1471 (26.65/ 7.68)	LKDED..NAWALrsrPASPSTTPessakdtpstrqSDIS.ENDNL...
 1477- 1508 (55.85/27.73)	LKDADMPDAWAV...AMYGDTLP............VDLH.LSEDLQNL
 1512- 1544 (50.89/25.78)	LPPMDSEDMMLF...PDYGAGTM............MDLDmLEKTMDSM
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     109.01|      23|      35|     869|     895|       6
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  872-  894 (42.97/13.79)	ATPQSKPAPRPQQAQPTPSHPAN
  923-  945 (34.65/ 7.86)	ASSKSQPGLNLTQEQMSKLTPAQ
 1370- 1391 (31.39/ 8.28)	ATPASIPKSVPKEQQVSAPEPA.
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21579 with Med15 domain of Kingdom Fungi
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