<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21577

Description Cyclin-dependent protein kinase-like protein Ssn3
SequenceMSQLSNSPPASSGSTAASARAASRNSAAPAFSDPGDSSDAMFTGYNNKKRVTERYKIVGFISSGTYGRVYKAEGRNGRTGEFAIKKFKPDKEGELQYSGISQSAIREMALCTELAHPNVVHTVEIILEDKCIYIVFEYAEHDLLQIIHHHNQPQRQAIPARTIRSILYQLLQGLVYLHRNWVMHRDLKPANIMVTSAGKIKIGDLGLARLFYKPLQSLFSGDKVVVTIWYRAPELLLGSRHYTPAVDLWAVGCIFAELLSLRPIFKGEEAKMDSKKTVPFQRNQMQKIVEIMGMPTKDRWPLLTAMPEYPQLSSLISGNAARFPRPQSGDGLERWYHQTLNNNQYPLGSGPDTPGPEGLSLLKQLLEYDPQKRLTAEKALLHPYFTVHGKPAESCFEDSKIKYPVRRVSQEDNDIRTSSLPGTKRSGLPDDSIIGRPAKRLKEG
Length444
PositionKinase
OrganismStemphylium lycopersici
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Dothideomycetes> Pleosporomycetidae> Pleosporales> Pleosporineae> Pleosporaceae> Stemphylium.
Aromaticity0.08
Grand average of hydropathy-0.449
Instability index51.22
Isoelectric point9.38
Molecular weight49696.30
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
cyclin-dependent protein serine/threonine kinase activity	GO:0004693	IEA:UniProtKB-EC
RNA polymerase II CTD heptapeptide repeat kinase activity	GO:0008353	IEA:UniProtKB-EC

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21577
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      72.30|      21|      48|      11|      31|       1
---------------------------------------------------------------------------
   11-   31 (34.27/26.14)	SSGSTAASARAASRNSAAPAF
   62-   82 (38.03/29.87)	SSGTYGRVYKAEGRNGRTGEF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     102.43|      29|      48|     244|     272|       2
---------------------------------------------------------------------------
  244-  272 (50.46/31.29)	PAVDLWAVGCIFAELLSLRPIFKGEEAKM
  295-  323 (51.98/32.43)	PTKDRWPLLTAMPEYPQLSSLISGNAARF
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21577 with CDK8 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MSQLSNSPPASSGSTAASARAASRNSAAPA
2) RRVSQEDNDIRTSSLPGTKRSGLPDDSIIGRPAKRLKEG
1
406
30
444










Molecular Recognition Features






MoRF SequenceStartStop




1) SIIGRPAKRLKE
432
443