Description | Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MPGLVMDDVSASASRDWGDSYNHHESNGNSTVVRGAHQVDSNGKSDNPQQVNGFKGDDGKGQGFNTAMVLKHGQSSVMPDSVQGLWAPPLMHITQGFFPYSQLVNRAVQQCYNDLCDVITELADSTQPQQSSSANGKPDPAAMQKRIRILEFAQTKRTEFIKLLVLSQWSRQAVDVSKLIDLQNFIRTRHFAYQTAVQRVADMKRDLVRAQVANPDLQTALEVLTMGRVSNMPEFGYKPPKPLSSKRLLATLQKINRIISTRLVTSDTIPSSLNDYRVHDGRATFSVQGEFELDLSIAEEDVTSQFYFIDIRFLFTPSSPIPKGRFFNELDSQINSILKTKGLSGCFDFIHNLVLVNKINILFKQAISLSRGQWIGALRVELLHRILVVHYWPDKSGPKSWLEIGAHSGRQQRQKVSYLGLRWVRDGKECESAQIHFDTETLSMESILRSVIAIHSAHILRAVYERLCTENLFANHRLSISMQMSKTEPGNCRLNVQLTETRYLNASLEPVSGTMCIHTIPSLLCRLDKGSASDDDFVNRISRLRCIAAMEEIESDAKIFGWESVDHRKFKVDIRRVFPSNILRASFFRNRVWGSSWIIAATTSLSGDDWWILRLKARPLSYPDGSGHARVVAGGFSVQSTRVSSGDQILSPRESRYHFPDLDYSLTGALVMYSNALWLSELGYQDVLPPMDQLQLGSRLEVPCLYLKFDIAKLPRQLRITPLEGAQSKSYVRETFTISYHGIDFRTKNAIVVAHGRFHTPLRKMGLKRLKLDDCVLLRRGGTAFAMRFLVAPGQPIMTDLFERIQRLNIALSLFHTLQQSKITVKSVSLSNLSFVYAPREGFEANIVVRLDRLGHAPDLDPAIVRLRDESLFRLRLDISFNNLSPHNRIKQSLGMILNRSGPGNGVQCVLQLLKLTLPVLRALDRLVTEPQHNSALRVQVSIRGAQTFQIHYFGLRFRFLVNALQRRDKIIWTLKDISSSEGQRDVEQAVEAKLQEKIYRGKGDGWQGLGNGAVAEVDQVGNLLSELDSCFADLTPPAALPAAPSEIAEKKPGKAAKDKGQRTNGTSKINRQSQEVPKESDVIMID |
Length | 1087 |
Position | Tail |
Organism | Talaromyces amestolkiae |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Trichocomaceae> Talaromyces> Talaromyces sect. Talaromyces. |
Aromaticity | 0.08 |
Grand average of hydropathy | -0.269 |
Instability index | 42.78 |
Isoelectric point | 9.36 |
Molecular weight | 122158.41 |
Publications | PubMed=28649280 |
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 ARBA:ARBA00003669 ECO:0000256 RuleBase:RU365082 |
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP21557 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 283.68| 82| 261| 243| 345| 1 --------------------------------------------------------------------------- 243- 327 (121.87/90.07) LSSKRLLAT.L..QKINRIISTRLVTS.....DTIPSSLNDY..RVHDGRATFSVQgEFELDLSI.AEEDVTSQFYFIDIRFLFtPSSpIPKGRFF 369- 410 (43.14/35.40) LSRGQWIGA.LrvELLHRILVVHYWPD.....KSGPKSWLEI..GAHSGR.............................................. 498- 588 (118.68/72.68) LTETRYLNAsL..EPVSGTMCIHTIPSllcrlDKGSASDDDFvnRISRLRCIAAME.EIESDAKIfGWESVDHRKFKVDIRRVF.PSN.ILRASFF --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 109.23| 32| 36| 591| 624| 2 --------------------------------------------------------------------------- 591- 624 (52.48/38.16) RVWGSSWIIAATTSLSGDDwwILRLKARPLSYPD 630- 661 (56.75/32.54) RVVAGGFSVQSTRVSSGDQ..ILSPRESRYHFPD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 124.62| 38| 149| 49| 89| 3 --------------------------------------------------------------------------- 49- 89 (64.89/60.35) QQVNGFKGDDGKGQ....GFNTAM.VLKHGQSSVMPDSvqGlWAPP 198- 240 (59.73/43.60) QRVADMKRDLVRAQvanpDLQTALeVLTMGRVSNMPEF..G.YKPP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 42.59| 12| 104| 762| 773| 4 --------------------------------------------------------------------------- 762- 773 (21.29/12.83) LRKMGLKRLKLD 867- 878 (21.29/12.83) LRDESLFRLRLD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 78.01| 24| 149| 881| 904| 5 --------------------------------------------------------------------------- 830- 857 (34.69/25.23) LSNLSfvyaPREGFEANIVVRLDRLGHA 881- 904 (43.32/33.68) FNNLS....PHNRIKQSLGMILNRSGPG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 116.13| 39| 217| 694| 740| 10 --------------------------------------------------------------------------- 694- 740 (58.20/51.52) LQLgSRLEVPCLYLKFDIAKLPRQ...LRI.TPLEGAQsksyvreTFTISY 911- 953 (57.93/33.38) LQL.LKLTLPVLRALDRLVTEPQHnsaLRVqVSIRGAQ.......TFQIHY --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) EIAEKKPGKAAKDKGQRTN 2) QSQEVPKES | 1047 1073 | 1065 1081 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab