<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21548
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MPLIMEEGLDVDDLFGDPNTLDLGLSAAQPTKGLAQRLDEMRLLGCCRKIAWSRLGCIAYISQDGLQVIVRHLACNPIDGKWALTEEYSQSQIPQLHLGQQLLHLCWNETGSDLAVLDASGRISILSISAALNSLGISRQTVVDPPDDGSQVVGMMWMNSNRAVHAFHQAAKLNGRWNYSPYRRKPIGPFHPAGKPALICFTRNGIMRLLYQNPDQRWAEVSAELKTTNQSDRILTHAACLPSPKKLSLYRVQIMWNPSNWDQTQQRQASGVMPFPVPSIRISHCKTELPGRVFSFNKDQSDDLQNLAPNQSFLYQLTNLDLVSGQFDNTGATTSPPWILAVYSSPFNSAGHDPQQQEPPASVLVRWQLETSTLNLHPVFEESLSKKTNGQQRTKLEIRRMEDIHFDKHVVSIDQIEFGCVLAITHDDSSVSFFDPKSMSQFAEGGDNNTVTSLAQAGFRFPSDTPGLNICFSPNSCLAVVLDADWQAQLRIAGYNFEPDGDLHEGKNSNGIIALALTFSRGCAIEYNTDDLIMTISRHLSTDAQNVFVNEVYRALPINCNFSMEQDKPMQHPYVPRCLSLQAALGFQNFQTPRGLPYSVPWAILHLRHASLLFAFFFQYSKQPKENESLDHDVLQMVYGNTKWALDFTQYLLDDLFALAREFEPVLDDQEALAQKGEGLRGVHTSSMASPFAGDGRGYSKELYTLIDSAPFRFNVYEKFLSSVESAIKNAYQRAGFGDDERRTPEKDLLLNSRIPAVMIPVLVSLFKQIIPAIQTEIDQMSIYLTDYSWLGFCSDRRTEHFRQTRAVDVVKKVPLRGFNLSNNNIEPNMSSEITSNGKKAGSSSRRRCVRCCETTGDPSSPRSILYFQLTLRLQLIRSCLCGGMWTFENGPPTTAATHKQVG |
Length | 903 |
Position | Tail |
Organism | Talaromyces amestolkiae |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Eurotiomycetidae> Eurotiales> Trichocomaceae> Talaromyces>
Talaromyces sect. Talaromyces.
|
Aromaticity | 0.09 |
Grand average of hydropathy | -0.305 |
Instability index | 45.90 |
Isoelectric point | 6.08 |
Molecular weight | 101128.51 |
Publications | PubMed=28649280
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP21548
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 437.92| 92| 92| 181| 272| 1
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27- 84 (61.42/32.49) ............AAQ.PT.K.GLAQRLDEMRLLGCC..RKIAWSRLGC.IA.YISQDglQVI..VRHLACNPI...........DGKWAL..........................
87- 176 (92.63/52.86) EYSQSQIPQLH.LGQ.QL.LhLC...................WNETGSDLA.VLDAS..GRIsiLSISAALNSlgisrqtvvdpPDDGSQV.VGMMWMNSNRAVHAFHQAAklnGR
181- 272 (166.23/100.89) PYRRKPIGPFHPAGK.PA.L.ICFTRNGIMRLLYQN..PDQRWAEVSAELK.TTNQS..DRI..LTHAACLPS...........PKKLSLYRVQIMWNPSNWDQTQQRQAS...GV
274- 363 (117.64/69.18) PFPVPSIRISHCKTElPGrV.FSFNKDQSDDL..QNlaPNQSFLYQLTNLDlVSGQF..DN....TGATTSP............PWILAVYSSP..FNSAGHDPQQQEPPA...SV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 229.26| 77| 100| 403| 490| 2
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403- 490 (112.16/113.86) DIHFDKH...VVSIdQIEF..GCVLAITHDDSSVSFfdPKSMSQFAEGGDNNTV.TSL.AQAGFRFPSDTPgLNICFSPnSCLAVvldadwQAQL
502- 585 (117.10/81.42) DLHEGKNsngIIAL.ALTFsrGCAIEYNTDDLIMTI..SRHLSTDAQNVFVNEVyRALpINCNFSMEQDKP.MQHPYVP.RCLSL......QAAL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 86.80| 28| 40| 602| 630| 3
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602- 630 (46.04/31.58) WAiLHLRHASL..LFAFFFQYSKQPKENESL
644- 673 (40.76/23.18) WA.LDFTQYLLddLFALAREFEPVLDDQEAL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 38.11| 11| 17| 691| 707| 5
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691- 703 (16.37/19.22) PFAGDgrGYSKEL
711- 721 (21.73/ 6.23) PFRFN..VYEKFL
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