<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21488
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MGDFPPPERTSVKASELVHRAVDKSYEDFRTLMHQLPTMREEERREPLLAHLQSSRKRFAQILAVLKWSVQSPLLQECDTLLQQTETYRNNVNETNDRLFFMHADLNRAKERRYDLSTAVDVLYGSSYLRLPTIIKNAMFPRELPEVDTEQAAAEVADIIRFRLIEAEIPEQFSNIKLEGGFVTCQAEGEFEIVLTIQGKEKDAKWRVISVNTALTDAQAFEGHSQAASTSALRIIRTNAPNAAHYNHLKNLVQRAMNKSEKPFVDAFMVMREFCSSLALQILASQGKLLMEGRWKNRIMIKHVRDQNILDICYWPKACVRKEAQALTEQQRLIQQLSDPVATARRGSALPYPESSLCVRLGFDPNKKKLLSVSLSPSLPPNLPGYASLLSALEVPSNMFLLSAENLLIAAMRAHVSAALFSIGRLLVVDSPDEKASTQLVSGEDVAMVCSDTSLRISRADIGGLQQFMEVTFDIREGSFIVSSVAAAKHSALYITVKQLERILNTQCKIELGGNVDKSFPNEFALVSGDGKGDKSNELIHTSVRKALCEIVADEVAQIGSSFKGIEVLRSVNLNWERYLAFRQQHGGQTEDLSISNTALYFQLTSSKESTCYLVIEIDKYGEVDGMNGNVHEAAEAEEYVRLPCFSLLQTSAGLPGQPSGVQFIQRFGAFKKEDLHPSVTRHNEIIVNGLRGSSRKRPYSSNGNSLVGRNVRSTKKALLDGGRVQESTGYWLDDAEHQSVSRNFVPHIASVLLHAINMCSERIQLQHFVNFARRRKSRIRYSGEAGTANREGTGGQVVTLSFPEKVNTDPLKIVAIQGHLKHGGGFELCLQLASPPFKFILPKKPKEHLLSDRSHYVNERGQLIFRYPTTMVTSELFSENPLEMFMVELICVVRPLCELAVKLEKMLTAVGRYTNDIKDDGHFFVESADPFAIVLACRAPNPRHCIAAGSSPDGLTTYRVTVQFKQKMGFVVNYSHKAEHPLMHFIQSALNGHGDPAQFVEALERTCVPMGILASVVESQLLCAKYYRQDPPPNAKDSAANGGPKAFGRGKMGGKGMKLGYKFKLPGEEKGYYAEKSIGGDDKSFVPAELVMIPRSQTQVRLSYGDRCAVDIYFLENHSVKMQSSSGGVRVPSCPSEKGIVMDCQNFAEKLRSTLSEMASA |
Length | 1162 |
Position | Tail |
Organism | Phytophthora cactorum |
Kingdom | Oomycetes |
Lineage | Eukaryota> Sar> Stramenopiles> Oomycota> Peronosporales> Peronosporaceae>
Phytophthora.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.265 |
Instability index | 40.97 |
Isoelectric point | 8.35 |
Molecular weight | 129274.44 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU365082
|
GO - Cellular Component | mediator complex GO:0016592 IEA:UniProtKB-UniRule
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:UniProtKB-UniRule
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP21488
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 252.39| 79| 116| 830| 917| 1
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830- 917 (122.14/102.31) CLQLASPP.....FKFILPKKPKEHLLSDRSHYVnERGQLIFrypttmVTSELFSENPLEMFM..VELICVvrPLCELAVKLEKMLTAVGRYTND
946- 1031 (130.26/84.29) CIAAGSSPdglttYRVTVQFKQKMGFVVNYSHKA.EHPLMHF......IQSALNGHGDPAQFVeaLERTCV..PMGILASVVESQLLCAKYYRQD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 63.19| 19| 116| 128| 148| 2
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128- 146 (33.35/27.76) YLRLPTIIKNAMFPRELPE
153- 171 (29.84/16.26) AAEVADIIRFRLIEAEIPE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 153.81| 54| 121| 200| 263| 4
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200- 263 (75.37/70.31) KEKDA...KWRVISvntALTD..AQAFEGHSQAASTSALrIIRTN.APNAahynhlKNLVQRAMNKSEKP
322- 381 (78.44/47.59) KEAQAlteQQRLIQ...QLSDpvATARRGSALPYPESSL.CVRLGfDPNK......KKLLSVSLSPSLPP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 94.21| 31| 340| 709| 747| 6
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709- 747 (41.54/48.87) GRNVRSTKKALLDGgrvqESTGYWlddAEhQSV...SRNFVP
1055- 1088 (52.67/33.59) GKGMKLGYKFKLPG....EEKGYY...AE.KSIggdDKSFVP
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