<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21458
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MPLMMEDGINVDDLFGEPASLELGLPTTTSTKGLAERLDEMRLLGCCQKIAWSKLGCIAYIAQDPSKVHVRYLQCQPTDGKWTLSDETPLLPVTEAHGGTALVHLSWNESGSELAVVDLSGRLSIYSIPIALNSVNGLRPPSLEPDDSAQIVGMLWLNTQRSVHAFYQAAKVQGRWAYSPYRRRPIGPFHPANKAALVYITRSGMIKLLYQNPDGKWAEISAELKNTSYSDRMLTHAALTATQNGILVATYSACQKICVYRVQINWNPPQYDPAQQPKQTPPQFPVPSFRFAHCKVETSCSVPGPVRNSGDPSDHLQPPFPNSLYCLTRLDVILPTSDNAAGSSATPWIVATFSILPQIAPDHPHQQGPSSIIVRWQLESAPLTLHPKFDEVTTKRNSMQLKAKAVLNRLEDIFCDRYVVSIDHIEYANVLAVTYDDSSISFYDPKTMAAFNGVDDANTVTSLAQAGFHYSPDTPGLHISFSPSACAAVVLDSSGHVQLRVLEHSYGADNGLYDENKFSAAIAALTLAFCRGCGSEVNTDDILLILIRQLSPDAQTSFINEVYRALPINCNFTVEQDKLMNHPYIPRCLSIQAALGNKGKIQQRGFASSVSWTILQLRHASILYPFFFQYNKGVQAEPHDPDVLRMVLGNTRWALDFSLYILHELFNLADEFEDVSSDQEAFNQKLKSTNSLSLIILLSSMSRAFLRFICRGLRGIHAGYANAPLTGDARVYYTEICQAVETSPAAIDVYEKFLAGVDSAVRHAYHGAGFGDAERPGPEKELLVSARIPPVLVTAVSTILRQTIPSLRSDVDRMDIYMRDYSWLGLDSDRRTELYRRTRGLDIIKKIPIRPSPSTNGTAQPSLGETKSKDGHAATGVAVGQPLRRRCVRCCEVSEGSYPPRSVLAFRMIFKLGHLRACICCGMWILESGSGSAEVGKPIGA |
Length | 941 |
Position | Tail |
Organism | Aspergillus uvarum CBS 121591 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.144 |
Instability index | 42.32 |
Isoelectric point | 6.59 |
Molecular weight | 103728.11 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP21458
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 184.25| 59| 300| 427| 491| 1
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427- 491 (85.34/68.85) YANV.LAVTYDDSSISFYDpKTMAafnGVDDAnTVTSLAQAGFHySPDTPGLHISFSPSACAAVVL
733- 792 (98.91/57.29) YTEIcQAVETSPAAIDVYE.KFLA...GVDSA.VRHAYHGAGFG.DAERPGPEKELLVSARIPPVL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 54.94| 15| 302| 63| 77| 2
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63- 77 (30.51/24.50) QDPSKVHVRY.LQCQP
367- 382 (24.42/17.85) QGPSSIIVRWqLESAP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 290.89| 69| 435| 125| 218| 3
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125- 193 (123.65/58.47) IYS.IPIALN.SVNG...LRPPSLEP.DDSAQIVGMLWLNTQRSVHAFYQ....AA.KVQG..RWAYSPYRR.RPI.GPF.HPAN
259- 321 (89.82/61.25) VYR.VQINWN..........PPQYDPaQQPKQTPPQFPVPSFRFAHCKVE....TScSVPGpvRNSGDPSDHlQP...PF..P..
562- 631 (77.42/30.85) VYRaLPINCNfTVEQdklMNHP.Y........IPRCLSIQAALGNKGKIQqrgfAS.SVS....WTILQLRH.ASIlYPFfFQYN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 88.86| 29| 133| 79| 111| 8
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79- 111 (45.22/41.55) DGKWT.LSDEtplLPVTeAHGGTALVH..LSWNESG
214- 245 (43.64/26.92) DGKWAeISAE...LKNT.SYSDRMLTHaaLTATQNG
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