Description | Mediator of RNA polymerase II transcription subunit 12 |
Sequence | MIPHPSAGVQPWSRSMRAPNNGLGRVEAFQALNQSEPQSEKPPMPVPPSLPRQPAVIDLTTIPGDAQESEPPTKRLKLDVTSGAYAATGSPAPVSNGEARTTPGTATAKPQSLTWRGRPAWSFQALLSETTGAVEVKDDDASAQGKTSSSPPPLPLLPWKYTPQETPATDATKIAEIAPVKEVKTTPYRIEVPTIAPKIKGEKVADFSPWTGNHPEDILNEHTAKQGHYDRTQVSQNESNTARPSLYAQLKHRSGLQMLSSVFAAALEKRQSHNMVTAPSSFKPPPRVTLTDNKREAWLRDLANPSVPLRRLSRTIPHGIRGKVLLDQCLGKWIPVPRAIWLARCVGANEIRAFKRKGTSGALALGLESKWVRDWTATVQQFLDGVVGICGAADWKVKMTYAVSLTSRLFFERLLDHDQYLSWFLLSLENASLNTIPVWLLMLGIYWSNIMRYRKRGRKLAEVLLEKLRQIKKSGHPETLQPLVDRLSRCIRRLVLEHTSSLILPNSWMTYKELISSCLNFKETPDQTMFHNLVERNSRVQLLKSQQEAKARLPQQKVISLFDSLRSAHDVTATASACLDAVDDKTVLVSKLLEWAATPFRHGSRRVYTSVRLLRKWKMSGIDIESHILNFVAGFDSNSRLNMEHIYHIFSELVRSQTFSVGRYLQWLMAKGLAHSPASENEAISSELRLLIQLPSHRLPEHVRNLRNMLIDRAGFSLEEENSLVAKLQMSIAGRLPHIFGSERSGVPKTNLSLPAELTWAVKSEIGLWIRRGVAEHYRKPGRYSSASCSWTHVPSRRYSNIPFLSDSGISALTPAEFCVIREILEGFGDLSMLADVLKQATTCDNSIVLASVADTVNYHFDTFCVISAVHDLFKGLVESYVRLKRFGAPSLDLIFSLIELGLRVPSEFNTVALLRQDLARIENRAAVAAPSPLSDHISVSTGQIDSLFQEKLDQTLLSGGGMDESTMDTSFASLTKALQDGHKKLSANEICRYMAYLRTFHPKRFDAMLVRWVCGLLKSQTRSTMARILPPLIGVGCVTIHAFVALVKKLLQSEKVVAVIPSVAELKLDLFELLVPPKHDQSRLADMVTYRFRLAQQEFLAKHPEESLDIIRDVVPLIGSENTDCLYGSRRDDLTECATMLLQLLLTQNPERIVQSCLQKFIGQHTASTALLQKALNSLLGFDSDASDKTAPEAEKVIRMNNDFSLPFCQLKLQLLFNAEAAGQDNNSIVDVMFKAAVADTKSHNDHWYGLVSLMSHDAIQQIRERAERSFFSIPMFEENSDSLQSIEAARLYLTMIEKLAPCIPEAGVPTVVPVLVEKMEFLLQKFVAMQANHTGAGDGRPTNQASPSFERSLAFWFSALLRIVVIHRASFNTPGLAPRSHGLPEQTRLLISIFCISLARLPNRVLRLYPSADYFPQSKPVESYRPCPGILLQTHALDVAACLVDIFPDEARQQCARFLKEKCPPFLQFQNDARFLYLLGPIVDSSNPPQPTSLPSPAAGGSTPTPSGSLAYGQQTPQQSSTAVPSGLSAGLSEGVNCIASHLRVQYRGRAIGAYPVRPWELLEDAAPIVGMNDTALSLKYFDARRVRA |
Length | 1591 |
Position | Kinase |
Organism | Aspergillus uvarum CBS 121591 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.178 |
Instability index | 51.24 |
Isoelectric point | 9.01 |
Molecular weight | 176734.08 |
Publications |
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
Component of the srb8-11 complex. The srb8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The srb8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 ARBA:ARBA00002895 ECO:0000256 ARBA:ARBA00003744 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP21448 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 160.36| 49| 433| 521| 569| 1 --------------------------------------------------------------------------- 521- 569 (81.81/51.19) FKETPDQTMFHNLVERNSRVQ.....LLKSQQEAKARLPQQKVISLFDSLRSAH 949- 1002 (78.55/48.86) FQEKLDQTLLSGGGMDESTMDtsfasLTKALQDGHKKLSANEICRYMAYLRTFH --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 205.48| 50| 433| 8| 57| 2 --------------------------------------------------------------------------- 8- 57 (87.47/52.11) GVQPWS.RSMRAP.NNGLGRVEAFQALNQSEPQSEKPPMPVPPSLPRQPAVI 68- 113 (64.08/35.87) ESEPPT.KRLKLDvTSG.....AYAATGSPAPVSNGEARTTPGTATAKPQSL 117- 158 (53.94/28.83) GRPAWSfQALLSE.TTGAVEVKDDDASAQGKTSSSPPPLPLLP......... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 123.92| 38| 685| 696| 738| 3 --------------------------------------------------------------------------- 696- 738 (56.97/49.89) SHRLPEHVRnlrnMLIDRAGFSLEEENSLVAKLQMSiAGRLPH 1382- 1419 (66.95/42.94) SHGLPEQTR....LLISIFCISLARLPNRVLRLYPS.ADYFPQ --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 84.00| 26| 143| 342| 371| 5 --------------------------------------------------------------------------- 342- 370 (38.09/36.24) LARCVGANEIRAFKRKGTsgaLALGLESK 383- 408 (45.92/27.05) LDGVVGICGAADWKVKMT...YAVSLTSR --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 99.06| 32| 272| 1025| 1059| 11 --------------------------------------------------------------------------- 1025- 1059 (46.93/36.14) TMARILPPLI...GVGCVtIHAFVALVKKLLQseKVVA 1296- 1330 (52.13/29.84) TMIEKLAPCIpeaGVPTV.VPVLVEKMEFLLQ..KFVA --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 38.07| 10| 547| 629| 638| 12 --------------------------------------------------------------------------- 629- 638 (19.36/13.08) LNFVAGFDSN 1177- 1186 (18.71/12.37) LNSLLGFDSD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 57.78| 16| 16| 1495| 1510| 13 --------------------------------------------------------------------------- 1480- 1495 (27.89/12.75) LLGPIVDSSNPPQPTS 1496- 1511 (29.89/14.21) LPSPAAGGSTPTPSGS --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) LGRVEAFQAL 2) LKLDV 3) LLPWKYTP 4) LTTIP | 23 76 156 59 | 32 80 163 63 |
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