<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21378
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MPLMMDDSINVDDLFGEPSSLELDLPPSASTTKGLAQRLDEMRLLGCCQKIAWSKLGCIAYISQDTMRVNVRHLQCRPSDGKWVLSDETPLMPVAEAHGGHGLAHLSWNEAGSDLAVVDLSGRISIYHIPFALNSINGLRQPAFVPDDGSQVVGMMWLNTQRSVHAFYQAAKVQGRWAYSPFRRRPIGPFHPVNKAALLCITRSGSMRLLYQNPDGRWDDISTDLKSTSYSDRLLSHAALVATQNGILVATYSLCQKIRFYRVQINWNPPQWDPAQQPKQMPNHFPVPSFRFTHSKVETSFTVPGTQRNDGEMTDLQSASNPLYSLSCLDIILPASDNSVGSTANPWIVAVFSTPPQVTPDHPGQQGPASVIVRWQLDTAPFTLHPKFDEITSKRNSIQTKPRPVLRRLEDITSDRYVISVDQIEYGNVLAVTYDDSSVSFYDPKAMAVFNGVDDANTVTSLAQAGFHYAPDTSGQHISFSPSACAAVMLDSDGQTHLRVMEHSYGAENGLYDENKFSAAIASLTLAFCRGCGSEVNTDDILLILIQQLTPDAQITFINEVYRALPINCNFTVEQDKLMNHPYIPKCLSIQAALGFNNKYKPRSFASSVSWSILQLRHASILYPFFFQYNKGIQAEPHDPDVLRMVLGNTKWALDFSLYILNELFDLADEFENLSADQEAFSQKLKTTNSVALIILLSSMSRAFLRFICRGLRGIYAGYNAPLTGDSRLQYAEICQALDTCPMRIDVYEKFLAGVDSAVRHAYHGAGFGDAERPGPEKELLVNARIPPVLVTAVSTILRQTVPGIKSDVDRMAIYMGDYGWLGFGTDRRSEWYRRTREVDIIKKTPIRMTVTQGSNGPQVGKSNNQGLLRRRCVRCCDVSEGTYPPRSVLAFRMIFKLGHLRSCICGGMWTVESGSNEGTK |
Length | 921 |
Position | Tail |
Organism | Aspergillus sclerotioniger CBS 115572 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes>
Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus.
|
Aromaticity | 0.09 |
Grand average of hydropathy | -0.210 |
Instability index | 41.49 |
Isoelectric point | 6.63 |
Molecular weight | 102480.47 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP21378
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 48.89| 13| 40| 163| 177| 1
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163- 177 (21.55/18.62) SVHAFYQAAkvQGRW
206- 218 (27.34/16.78) SMRLLYQNP..DGRW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 288.68| 94| 209| 48| 151| 2
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48- 151 (147.24/132.66) CQKIAWSKLGCIAYISQ.DTM...RVNVRHLQCrPSdGKWVLSD.ETPL.MPVAEAHGGHgLAHL.SWNEAGSDLAVVDLsgrIsiyhIPFALNSINGLRQPAFV..........PD.DGSQ
255- 366 (141.44/95.79) CQKIRFYRVQINWNPPQwDPAqqpKQMPNHFPV.PS.FRFTHSKvETSFtVPGTQRNDGE.MTDLqSASNPLYSLSCLDI...I....LPASDNSVGSTANPWIVavfstppqvtPDhPGQQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 109.10| 35| 36| 811| 846| 3
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811- 846 (61.93/38.85) RMAIYMGDYG.WLGfGTDRRSEWYRR.TREVDIIKKT.P
848- 885 (47.17/24.62) RMTVTQGSNGpQVG.KSNNQGLLRRRcVRCCDVSEGTyP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 95.46| 29| 36| 532| 560| 5
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532- 560 (48.36/34.71) CGSEVNTDDIL..LILIQQLTPDAQITFINE
569- 599 (47.09/33.60) CNFTVEQDKLMnhPYIPKCLSIQAALGFNNK
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