Description | Mediator of RNA polymerase II transcription subunit 13 |
Sequence | MDFPGGSITNIRVIDGFSQIYWRIYTEEPNSANTPGESPANGYTILKHLSRLKDLELQIRDRDCLVSSYPRRLCLWVFSATPGFESLLPLSANEAKDDSSRLAIGSATMKASSSGNVSSLDLVKNLSTEPQNAPGTTGPQRQNALTPYATIYASFISAVSGAVSLQLVRQRNAIPLGSRTLFTAVERDSYDCFVKNDPLSASSLITLQIQLTSVGKLTVALQTVSQAGLRRLLAPEDDPAGIHDIPPGTDLWLSPSGSISRLVAANLSRLNAASPYPSSAGGPGNDKSSMATRKQWKVNVLWWLANFGLPVDEIDEEAWVEVEVWEPFYSRLAGEIGRSNDESSSTLPLKRILWPAIYCFKRTKSASSDSYGELDSVGPVLGDPLDFAEKWRVTEKPTFIEASPKPSSVHQEPQARDQDALSPDMPNLPEGIESLSRASQYPELQTASLVYPTPPDGAAATGLNPTVPSDVFPDDLEQGSSFMQSSRQNYHGQLNKDRTGAEVISFGPSAGLVVGSGLYDTNDDDDLFGDINERDFGSKGLTDADFSFFDDPDFDHVGGGGGEQEDPIHAMSDFMDTDEPELQPTVDEQASPEQTPAMDIDSSRISPVVEAADLQQEKAVPEAKTPVSSPRDGKPRTISPPLSPVEVKKILFPEPHIGSQHLVKQGQMPGYYNAVAFKQNMSLWDRKYSAEGKFGFTFRGREGPKGADAATSDIPTIGLPRRSGKLKSSTSKEPDSQASPTSGMQASSSDTDSSSDASVESDESGSESGLSPATSSTRKRKRTRSNSGTSLALSQDKAFVRADQETTPQRPEDSVFLGNFLSTFSDWSMAGYFSLAQNQVSPVLIRKDIQVQIAQLLVDQVTQSSLDHKIDGNLGLSDYDDEAYSLQTQLGDAAFVGGMERLDLNGFVSLQDASTLSPPTSNGPNPRQSSQRKEAGKGTILKIPPPHLRVCRGKDFLETLPPAISFWETFGLEPAHGQKDIFAYCIHPHFAAEAADAFLERLGLVYSGCNLGSHTRGERSNFFDRGLGSWDISPSEDSRYFEVMQSLKTICGVLGSAFLNTPPSKDSNLVVYIVNPFTHAAALVDICSAFWSLFQKYIADADKQQARQLNELVLQIIPIDFVTATGSLVVPPQADYLNLALEVYSRCPPKSTQPSLINCAPPVLLAEPLPRSIGFKLSSEGSSPLQEGKCLHIACSRSLDQRWISVAWSDNFGALQRNMSYCLRFRNSLMTRPLVEVRSEIWKATRDIMDRIQARWRVVIVNTDPVDQEEVDTWSNFADQYGKARSITLDLVILSANTTPDLYLEPPFLPVPLSVFNQQSSSTPVATPNLGGSVSSPDQLGNAPTPPGGLGVPANASTPTDALPEIESESLITDIYDETWGVVLSHRLNSSLHQTEYRPALASGYLLRRKGSTDGDGLYTMSVNILHARRSPSSYDTLLREILGMYRDLATLARARGTRTVQQGTLPWHVATAVKAQTMLSYAL |
Length | 1484 |
Position | Kinase |
Organism | Aspergillus sclerotioniger CBS 115572 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus. |
Aromaticity | 0.08 |
Grand average of hydropathy | -0.365 |
Instability index | 53.91 |
Isoelectric point | 4.95 |
Molecular weight | 161509.57 |
Publications |
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 RuleBase:RU364134 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP21361 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 305.36| 94| 127| 1205| 1303| 1 --------------------------------------------------------------------------- 1205- 1303 (154.05/97.42) SVAWSDNFG.ALQRNMSYCLRFRNSLMTRPLVEVRSEiwKATRDIMDRiqaRWRVVIVNTDPVDQEEVDTWSNFADQYGKARS........ITLDLVILSANTTPDLY 1333- 1435 (151.31/83.56) SVSSPDQLGnAPTPPGGLGVPANASTPTDALPEIESE..SLITDIYDE...TWGVVLSHRLNSSLHQTEYRPALASGYLLRRKgstdgdglYTMSVNILHARRSPSSY --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 442.64| 119| 131| 372| 500| 2 --------------------------------------------------------------------------- 372- 482 (170.47/104.41) .............................................G.ELDSVGP....VLGDPL................DFAEKWRVTEKPTFIEASPKPSSVHQEPQARDQDALSPDMP..NLPEGIESL.S..RASQYPELQTAslvyPT.....PPDGAAATGLNPTVPSD..VF.PDDLEQGSSF 483- 620 (129.91/84.30) MQSSRQnyhgqlNKDRTG............................aEVISFGPsaglVVGSGLydtnddddlfgdinerDFGSKGLTDADFSFFD.DP............DFDHVGGGGG..EQEDPIHAM.SdfMDTDEPELQ......PTvdeqaSPEQTPAMDIDSSRISP..VVeAADLQQEKAV 627- 766 (142.26/80.16) VSSPRD......GKPRTIspplspvevkkilfpephigsqhlvkqG.QM....P....GYYNAV................AFKQNMSLWDR.KYSAEGKFGFTFRGREGPKGADAATSDIPtiGLPRRSGKLkS..STSKEPDSQAS...........PTSGMQASSSDTDSSSDasVE.SD..ESGS.. --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 227.12| 77| 788| 88| 165| 4 --------------------------------------------------------------------------- 88- 165 (123.11/63.57) LPLSANEAKDDSSRLAIGSATM.....KASSSGNVSSLDlVKNLSTEPQNAPG.TTGPQRQNA.....L...TPYATI..YASFISAVSGAVSL 874- 966 (104.00/49.85) LGLSDYDDEAYSLQTQLGDAAFvggmeRLDLNGFVSLQD.ASTLSPPTSNGPNpRQSSQRKEAgkgtiLkipPPHLRVcrGKDFLETLPPAISF --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) IYWRIY 2) NERDFG 3) VKKIL | 20 532 647 | 25 537 651 |
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