Description | Mediator of RNA polymerase II transcription subunit 12 |
Sequence | MIPHPSAGVQPWGRSVRALNNGSGRVDVAQAMGQPDPQLEKLSMPAPQPLPRQPAVIDLTTGASDSQDREPPAKRLKLEVPSGSGAADGSPAPGSGGELRSTPGTAGSKPQPLSWRGRPVWSFQALISETTGTAETKEDDTASQGRNHASPPPLPLVPWKYTPQESSESDSAKTGELPAAKEVQTTPYHIVIPSDAPKVKGERVADFSPWTGNHPEDILNEHTAKQGHYDRTQVSQNETNTARPSLYAQLKHRSGLQMLSSVFAAALEKRQNHNTVTAPSSFKPPPRVTLTDNKREAWLRDLANPSVPLRKLSRTIPHGIRGKVLLDQCLGKCIPVPRAVWLARCVGANEIRAFKRKGTSGALALGLETKWVRDWTSTVQQFLESVVSSCGTPDWKMKMTYAVSLTSRLFFERLLDHDQYLAWFLLSLEAAPLNTVPVWLLMLGIYWSNIMRYRKRGRRLAEVLLEKLRQIKLPGQHTALEPLVERLSRCIRRMVLEHTSSVILPNSWDKYKDLISSCLNLEEMPDKTMLQNLAERNVRVQLPKIHQKTAQRLPQQHVIHLFDTVRSTHDVSSTSSACLNAVEDKASLVSKLLEWAATPFRHGFRRVYISVRLLRKWKMSGVDVDTHILAFLANVQVANQLNMDNVYHIIAELVRSQTFSVGKYLQWLMAKGVTNDPSASPHETMSNDVRLLLQLPLARLPEYVRSLRNTLLNRAGIPPSQEESTIAAIKASIAQQLPKIFGAQTDDAMLADLSLSDLTWAVKSEIGLWIRRGVTGHFREPTRKYAHIPLLADSGTSALTAHEFYNLRNVLESFGDISMLADVLKQATTSGDSIVLASVADTVNYHFDSLCVIGAATDLFKGLVESYARLKRIGLPGLDLIFSLIELGLRMPSEFNTVALLRQDLSRIEGKSALAAPSPLSDHIPMTSGGVDSSFQEKLDQILFSGGGLDESSLDSVFTSLTRALGNHGQDKLSANDICRYLAYLRSFHPKRFDAMLVRWVCGLLKSPSRSVMTRILPPLIGVGCVTIHAFVMLVRKLLQSERVASVIPNVADLRLNLLELLVPPEPSQSRYVDMVTYRFYLAQQEFLDKHPEQCLEIIRDAVPLHDTERPEAGGPSQTDLSNCAVILLRTLLTQKPERMVQSCMQKFIGQHPASTAILQKALDSLLGFDPQSTPDMSEAERVISINNDFSLPICQLKLQILFNAEAGSQVDNGIVDVMFKAAMADARSNRDHWYGLVSLMSLDAVRQIRERAERGFFSVPMHDESTSDSSVADKSGSIETARLYLTIIEKLAYSIPEVGAQSVASALVEKMELLLQKFVSMQPNSTGASDAGQTAQARSNFERSLAFWFSALLRLIVIHRAAFNTPSLAPRPTGLQEQARLLTSIFCISLARLPDRVIRLYPSANYFPHPVQSENYRPCPGILLQTHALDVAAALIDTFPDEARHQCARFLREKCPPFLQFQNDPRFLYLLGPIVDTSNLNPTVPASLPSPAAGASTPTPTANLPGGAAIPQQAISSAPSGLPAGLSEGVNCIASHLRLQYRGRVLGAYPVRPWELLEDAAPIVGMNDTAVSLKYFDARRVRA |
Length | 1584 |
Position | Kinase |
Organism | Aspergillus heteromorphus CBS 117.55 |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.182 |
Instability index | 48.49 |
Isoelectric point | 8.83 |
Molecular weight | 174810.44 |
Publications |
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
Component of the srb8-11 complex. The srb8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The srb8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 ARBA:ARBA00002895 ECO:0000256 ARBA:ARBA00003744 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP21360 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 116.05| 46| 91| 1172| 1219| 1 --------------------------------------------------------------------------- 1172- 1210 (46.82/34.17) ......................................................QSTPDMSEAERVISINN.DFSLPICQlKLQILFnAEAGSQ 1211- 1302 (47.91/26.40) VDNGIVDVMfkaamadarsnrdhwyglvslmsldavrqireraergffsvpmhdESTSDSSVADKSGSIETaRLYLTIIE.KLAYSI.PEVGAQ 1304- 1342 (21.32/ 7.33) VASALVEKM.................................elllqkfvsmqpNST.GASDAGQTAQARS.NF.................... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 219.26| 74| 96| 340| 435| 3 --------------------------------------------------------------------------- 340- 422 (110.66/133.66) VW....................LARcVGANEIRAFKRKGTSGALAlGLETKWVRDWTSTVQQFLESVVsscgTPD.WKmkmTYAVSLTSRLFFERLLDHD..QYLA 438- 534 (108.60/72.22) VWllmlgiywsnimryrkrgrrLAE.VLLEKLRQIKLPGQHTALE.PLVERLSRCIRRMVLEHTSSVI....LPNsWD...KYKDLISSCLNLEEMPDKTmlQNLA --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 184.88| 59| 97| 977| 1043| 4 --------------------------------------------------------------------------- 977- 1043 (97.14/60.59) DICRYLAYL..RSFHPKRFDAML..VRWVCGlLKSPSRsvmtrilPPLIGVGCVTI.HAFVMLVRKLL..QSER 1074- 1139 (87.74/41.83) DMVTYRFYLaqQEFLDKHPEQCLeiIRDAVP.LHDTER.......PEAGGPSQTDLsNCAVILLRTLLtqKPER --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 173.46| 53| 98| 649| 711| 5 --------------------------------------------------------------------------- 655- 707 (94.38/77.24) RSQTFSVGKYLQWL.MAKGVTNDPSASPHET.MSNDVRLL...LQLPLARLPEYVRSL 1344- 1401 (79.08/43.21) RSLAFWFSALLRLIvIHRAAFNTPSLAPRPTgLQEQARLLtsiFCISLARLPDRVIRL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 172.17| 49| 122| 83| 132| 6 --------------------------------------------------------------------------- 22- 54 (33.40/12.62) ............................GSGRVDvaqamGQPDP...................Q...L..EKLSMPA.....PQPLP.R.QP.... 55- 123 (80.73/39.65) AVIDLTTGasdsqdreppakrlklevpsGSGAAD.....GSPAP...................G...SGGELRSTPGTAGSKPQPLSWRGRPVWSF 125- 207 (58.04/29.37) ALISETTG........taetkeddtasqGRNHAS.....PPPLPlvpwkytpqessesdsaktGelpAAKEVQTTPYHIVIPSDAPKVKGERVADF --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 92.97| 31| 172| 719| 757| 7 --------------------------------------------------------------------------- 719- 757 (38.97/50.70) PSqEESTIAAIKasiaQQLPKIFGaqtDDAMLADLSLSD 892- 922 (54.00/38.91) PS.EFNTVALLR....QDLSRIEG...KSALAAPSPLSD --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) FQALI 2) LVPWKYTP 3) REPPAKRLKLEVP | 123 156 69 | 127 163 81 |
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