<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21342

Description Uncharacterized protein
SequenceMLVSPSSLVPHVIELEEDKEDLLPSAPITLPGLLRPSVLVLEAYLTTSSTFLVTPHTHIQAALRRVSSSLSSPLDKRDVFIAPWGEWGRLVSEKGLKIGAWEERWETSVREYLQDCGILSVPNRQWEEKSILEEVIDAGRWRRVEIWVHIKDHPSEGMGILVKILWPDALLFLRTLEGDTNGLWSEGEDCDAFWKKVFDAPEYARFVSERLLRSLVVVLKDKKELGAEWWDIPSAVDWAEEWMEGKEDREKMVLARREEKKRRQQEQERIKQEAEAEKEQQSKAAEPILDVKEEGSVKGKLKHLDEAKKDGLVAGGNADAYPTPPDGGQQQRLPEPSSISSGSSAPNTTSNTATTTVATDMDLDWIDGVMPDAVPDPARKQSDATGGVGLARDFTAVGRRRR
Length402
PositionKinase
OrganismTuber magnatum (white Piedmont truffle)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Pezizomycetes> Pezizales> Tuberaceae> Tuber.
Aromaticity0.06
Grand average of hydropathy-0.542
Instability index64.79
Isoelectric point5.03
Molecular weight45131.41
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21342
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     124.03|      43|      46|     243|     287|       1
---------------------------------------------------------------------------
  243-  287 (63.23/41.69)	MEGKEdrEKMVLARREEKKRRQQEQERIKQEAEA.....EKEQQSKAAEP
  289-  336 (60.80/34.20)	LDVKE..EGSVKGKLKHLDEAKKDGLVAGGNADAyptppDGGQQQRLPEP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     126.86|      37|      38|      65|     101|       2
---------------------------------------------------------------------------
   65-  101 (64.83/38.46)	RVSSSLSSPLDKRDVFIAPWGEW.GRLVSEKGLKIGAW
  104-  141 (62.03/36.50)	RWETSVREYLQDCGILSVPNRQWeEKSILEEVIDAGRW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.88|      12|      28|       5|      16|       3
---------------------------------------------------------------------------
    5-   16 (21.74/14.48)	PSSLVPHVIELE
   31-   42 (21.13/13.88)	PGLLRPSVLVLE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21342 with Med13 domain of Kingdom Fungi
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