<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21328

Description DUF1212-domain-containing protein
SequenceMAADRQQHPLNLEGTEQSSFQNTAEHATTTLARETGGEGSPAIEVGSRQPTGTSTPGGLNGETVDGNTGTGGRGSGSAPSSATARRGRVHWDSGAGTHPGLASKRFQGQHGGPTVTVRQPAAAATQAGGGVVPTSSTSVQRAHHPGPLMLHTRLSPMNEQPSEGIHQGLEEGKAQENRQLVPTLSLTGAKSLDERGLDNRAFLELQRELQRHEAHEGTDAVVAENGDWIEMQGGGQQQQQQQSQQQQQQQQQQRRRKSKAETPDWASSGTSTPGGGDWTSESGSYDPANDSDLDHIDFMPGETDGLPARRKKKKGAAEEEDAQPKGWARIRGLMFGKGDEDEAGKAEAQTASSPTSRPYEEGGPTNTKSVPVTTSTGTRPGGPRSRPTKFEREAAKLVRAHKLMTGQGAGSMSEDDGMPGVSSMPTNKRDHLDSGASTPDNLDTAANLSARPIAAGGVLGNLLKLYEQQQKEQQAARKASGMSSEATSPLSTPGPAGGSATGAGGAAAGIGGHGVGDGNLSDLVAAELRREDAAAKARGARPISSTSSGVDSPSRRRMSWAPSGGNSPGWTKDITSGGLAIAGAGKKVLSIAAKEAGIDEAIDERPKASRSSAGTIGGLIATTGNLIGAVSPYHAQLGPNPKRPGYTLDRYLLPEMNAKTLKRTAEIVADAAPRPHWRSQPGTPGAGHHSPGMSSLDHKEPDSAETQAMTPPSGGAHSPRKSFTRPSSIINVRPNSTKTALHTRKNSAGTAPHSAGAGAHLHLPHMPNFARTWTGHSNVNTPDVLGDAHGSDYFGKEELDEKAAKAEWQRKLKRRAKDKRKKEEIFITMHVAAILQRQEFLMKLARALMMFGAPTHRIETQIQQTARVLEINCRCIYLPNLMLLAFGDDTTHTSETKFIKQGGGLDLTKLTDMHSIYWNVIHDKIGVAEASSQLDELMRRKPIISRIPMVIIGGFCSSFICVGPMGFSGSFIDALAAFPLGCFLVFCQSVITTELFSNVFEILFAAINSFVASALASTGYFCYAGVVSGSIVLILPGFIVLSGSLELQSKNLIAGSVRLVYAIIYSLFLGFGISIGYSFWLLFSGSDSDSQTLRQCSVVHNDKWWMSDVPLIWALLTVPGYSIALSIRNQAKVTRKEFPVMVAIAIAGWATNHFAAQSKSLSQRSDVTSALGAMAVGLLSNVFGRIYDGKSYTVACVGVLYQLPSGLSGGGGLLSFANDQNNSAGNISSGFSVAQSLVEVALGLTVGLYAATVIAYIVGGRKIRGGGLFSF
Length1271
PositionTail
OrganismAcaromyces ingoldii
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Ustilaginomycotina> Exobasidiomycetes> Exobasidiales> Cryptobasidiaceae> Acaromyces.
Aromaticity0.06
Grand average of hydropathy-0.365
Instability index44.91
Isoelectric point8.87
Molecular weight134206.00
Publications
PubMed=29771364

Function

Annotated function 
GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21328
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     132.09|      34|      34|     828|     861|       1
---------------------------------------------------------------------------
  805-  824 (22.28/13.93)	.........KAEWQRKLKR.....R.AKDKRKKEE
  828-  861 (59.70/53.42)	TMHVAAILQRQEFLMKLARALMMFG.APTHRIETQ
  865-  897 (50.10/43.29)	TARVLEINCRCIYLPNL..MLLAFGdDTTHTSETK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             9|     505.68|      69|      69|      33|     101|       2
---------------------------------------------------------------------------
   33-   87 (79.06/27.45)	......................................................RETGGEGSPAIEVGS............R..QPTG..TS.TPGGL............N..GET...VDGN...TGTGGRGSGS......AP.S.SATAR...RG
   88-  155 (87.16/30.99)	RVHWDSGA...GTHPGL..................................askRFQGQHGGPTVTV..............R..QPAA..AA.TQAG................GGV...VPTS...STSVQRAHHP......GP.L.MLHTR...LS
  156-  252 (52.55/15.87)	PMNEQPSE...GIHQGLeegkaqenrqlvptlsltgaksldergldnraflelqREL..QRHEAHE.....................G..TD.AVVAE............N..GDW...IEMQ...GGGQQQQQQQ......SQ.Q.QQQQQ...QQ
  253-  315 (49.28/14.44)	QRRRKSKA...ET.P...................................................................dwASSG..TS.TPGGGdwtsesgsydpaN..DSD...LDHI...DFMPGETDG.......LP.A.RRKKK...KG
  316-  362 (30.56/ 6.26)	...............................................................AAEEED............A..QPKG..WA.RIRGL.............mfGK......GD...EDEAGKAEAQ......TA.S.SPTSRpyeEG
  369-  428 (40.66/10.67)	SVPVTTST...GTRPG........................................................................gpRS.RPTKF............E..REAaklVRAH...KLMTGQGAGSmseddgMP.GvSSMPT...NK
  429-  528 (56.68/17.67)	RDHLDSGA...STPDNL...dtaanlsarpiaaggvlgnllklyeqqqkeqqaaRKASGMSSEA.................T..SPL....S.TPGPA............G..GSA...TGAGgaaAGIGGHGVGD......GNlS.DLVAA...EL
  529-  596 (76.12/26.16)	R.REDAAAkarGARP.I....................................sSTSSGVDSPSRRRMS............W..APSG..GN.SP.GW............T..KDI...TSG.....GLAIAGAGK......KV.L.SIAAK...EA
  674-  721 (33.60/ 7.59)	RPHWRSQP...GT.PG.........................................AGHHSPGMSSLDhkepdsaetqamT..PPSG..GAhSPRK............................................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      72.86|      21|      35|     967|     987|       5
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  967-  987 (40.64/25.83)	FSGSF......IDALAAFPLGCFLVFC
  996- 1022 (32.22/18.96)	FSNVFeilfaaINSFVASALASTGYFC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.24|      19|      35|     734|     753|       6
---------------------------------------------------------------------------
  734-  753 (29.92/20.45)	PNSTKT.ALHTRKNSA...GTApH
  767-  789 (27.33/13.22)	PNFARTwTGHSNVNTPdvlGDA.H
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21328 with Med15 domain of Kingdom Fungi
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