<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21321

Description Uncharacterized protein
SequenceMAPAPASSHAISLPKQGLPLEYLTQLQRRLGQLLISIGELQTHVYETVSLDDWPGLLSRHLTLLSQTHTLTTALLSPRSASQAPSLVALLTREAQITNLYADPSSTETSLASLAPLPQTAAPSNPLEASSAAAARQKRLAPRTSTGRHHAPHPVQPVDVEKSNTLVPALLLAKAAPAVDDQVEARLAAFISEADAAEGANASTMPAIRWRSRISRARHKTVKHDDFAGQMTRLWIHCREAPDEYGEKYDWNMRLSLEESDDEADEGEGEDNEGEDIGVEAESEKRKRKREDEDENGKREDPLSVDQVLSFLKTGTRA
Length317
PositionHead
OrganismAcaromyces ingoldii
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Ustilaginomycotina> Exobasidiomycetes> Exobasidiales> Cryptobasidiaceae> Acaromyces.
Aromaticity0.04
Grand average of hydropathy-0.565
Instability index51.33
Isoelectric point5.28
Molecular weight34667.23
Publications
PubMed=29771364

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21321
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      90.58|      22|      22|     254|     275|       1
---------------------------------------------------------------------------
  239-  257 (33.57/19.37)	EAPDE..YGEKYD.WN..MRLSLE
  258-  279 (38.05/22.79)	ESDDEADEGEGEDNEG..EDIGVE
  281-  300 (18.96/ 8.23)	ESEKRKRKREDEDENGkrED....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      76.28|      19|      23|      61|      79|       2
---------------------------------------------------------------------------
   41-   54 (18.47/ 9.03)	.....QTHVYETVSLDDWP
   61-   79 (29.97/18.85)	LTLLSQTHTLTTALLSPRS
   87-  105 (27.83/17.02)	VALLTREAQITNLYADPSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.07|      20|      23|     113|     135|       3
---------------------------------------------------------------------------
  126-  148 (27.99/15.84)	LEASSAAAARqkrLAPRTSTGRH
  199-  218 (35.08/13.29)	ANASTMPAIR...WRSRISRARH
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21321 with Med8 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) LASLAPLPQTAAPSNPLEASSAAAARQKRLAPRTSTGRHHAPHPVQPVDV
2) YDWNMRLSLEESDDEADEGEGEDNEGEDIGVEAESEKRKRKREDEDENGKREDPLSVDQVLSF
110
248
159
310










Molecular Recognition Features






MoRF SequenceStartStop




1) EGEDIGVEAESEKRKRKREDEDE
2) KREDPLSVDQVLSFLKTGTRA
272
297
294
317