<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21282

Description Uncharacterized protein
SequenceMAADYWRSSQANQWLLDPLDLEVSRVEDLRYAGDKDKLAASTIFLASAISSLAKRLHLRQRVTATATVFFHRFYSVPPNGYTNTDPCLVATACVYVASKVEETPIHVKTVMHEAGKMWNEYGHTTFPISSVDLAEMEFYLLRDLDYHLVLHHPYRPLLQLAGTVGKAAVERAEAAAQSSNKSGAAGRGAASSGQIGVGMPYGLGIHADALGVGSSKMGGMSFDMTNASAAGNHSASNGKEGNDEERERDRREEEAARKALVSGDHGLPIARVEEIDQDVVQMAWFLLNDTYRHAHLHLLYPPYILALAALCLALVLHDPSREKMLASVTKMEGRRKRARDLDEAGGGEGEKSTKVAASTPAASSAAPPMPPRAAPSTIPPRPAHLPPKPGGSTSGFPTRPQASHPSPGIGSSHDDSPAAGAPGLTASSSSIPSKPTPPSDVLTFLSLLNLSPRSQLASCIQSILDGYATWMRCHSSLLEGKRIVGWLDEWRRKREEELRVLEHEGLLMAASGRKEGGPGAGKKG
Length524
PositionKinase
OrganismJaminaea rosea
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Basidiomycota> Ustilaginomycotina> Exobasidiomycetes> Microstromatales> Microstromatales incertae sedis> Jaminaea.
Aromaticity0.06
Grand average of hydropathy-0.343
Instability index50.98
Isoelectric point7.06
Molecular weight56238.96
Publications
PubMed=29771364

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
cyclin-dependent protein serine/threonine kinase regulator activity	GO:0016538	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21282
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.30|      13|      15|     358|     372|       1
---------------------------------------------------------------------------
  358-  372 (20.59/11.66)	STPAASSAapPMPPR
  376-  388 (24.71/ 8.63)	STIPPRPA..HLPPK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     136.76|      42|      44|     153|     196|       2
---------------------------------------------------------------------------
  153-  196 (61.17/40.11)	PYrPLLQLAGTVGKAAVERAEAAAQSSNKSgAAGRGAASSGQIG
  200-  241 (75.59/41.07)	PY.GLGIHADALGVGSSKMGGMSFDMTNAS.AAGNHSASNGKEG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     106.91|      30|     163|     104|     151|       4
---------------------------------------------------------------------------
  122-  151 (55.17/64.89)	GHTTFPISSV.....DLAEMEFYLLRDLDYHLVLH
  263-  297 (51.74/24.56)	GDHGLPIARVeeidqDVVQMAWFLLNDTYRHAHLH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.08|      12|      16|     389|     402|       5
---------------------------------------------------------------------------
  389-  402 (19.34/12.62)	PG.GSTsgFPTRPQA
  407-  419 (18.74/ 6.41)	PGiGSS..HDDSPAA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21282 with CycC domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) EKMLASVTKMEGRRKRARDLDEAGGGEGEKSTKVAASTPAASSAAPPMPPRAAPSTIPPRPAHLPPKPGGSTSGFPTRPQASHPSPGIGSSHDDSPAAGAPGLTASSSSIPSKPTPPSDVLTFL
2) SAAGNHSASNGKEGNDEERERDRREEEAARKALVSG
322
228
445
263










Molecular Recognition Features






MoRF SequenceStartStop




NANANA