<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21262
Description |
Mediator of RNA polymerase II transcription subunit 33B |
Sequence | MDFEPEFPKTTNTRYKCAACYKQYKKKEHLVEHINVSFHSVHQPRCGVCKKHFKSFESQREHVTGPLAKENCKRVFSEQGCDLCLKIFDSPNSLSAHKFMCRLSAPVPLVTMMERCEEFKHDINSSNEYHVGDGTEAIALDCEMVAGGSDGSLDLCARVCLIDEDETILFHTYVQPQYPVVNYRYEVTGLTEELLRDGMPLQKVQDKVLQILYNGKTKLLVGHSLENDLDCLRINYPDYLLRDTANYHPLMKTNLVSHPLKYLTRTYLGYDIQSGFHDPYEDCVSAMRLYKRFCALDHQKEGNVASLAMLCAKDIPGSFDSWETDKLEKMTLHELYEMSRPNYKYFICVIRIPYRVRSFCPVVHVMRCLKVKRVSYSPSPLRTRTATRSSGRFRLSSSLNSAAVALPSVELAHLLVSHICWANHVPITWKFLEKALTVKIVPPMLVLALLSTKVVPNRQLHPAAYRLYMELLKRHTFLFASQLNGPNCQKIIKSIDDVLHLSQLYGLQVCEPGVVIVEFVFSIICELLDASLDDEGLLELTPDKKSRWSTRPEDMEIDGHDCFNEKRSEQNEGLQKVNTAMAIEIIVELLQNKVTSRILCLTRRNLPSHWGGFIQKIQVLAANSSVLRTLKHITPESLLQLTSDTRRLLTRECKIIARKEFHAVLSSGSLRSSASQSHGVSSSAFWLPIDLFLEDAMDGSEVAIISAVETLTGLVKALQAVNGTTWHNTFLGLWIAALRLVQRERDPREGPVPRLDTCLCMLLSITTLAVTNIIEEEEAELMEEIEGDRTNQRKEQAPGKRRKAKAIMSRSGLTVSNGYYESVSVNDMPINCMGNLRHLIVEACIARNLLDTSAYFWPGYVSARSSQVLRNVPGQVPGWSSIMKGSPLTPSLVNALVATPASSLAEIEKIYEIAVNGSDEEKISAVTILCGASLIRGWNIQEHICLFIINLLSPPVPADYSGSDSHLISYASFFNVLLVGVSSVDTVQIFSLLGLVPLLAAALMPICEVFGSSIPNISWTPTTGEELSCHTVFSNAFTLLLRLWRFDHPPLEHMMGDSPTVGNQAGPEYLLVLRNSRLASFGNSPMDRIKSRRVSKFITFPSKTITMDCFPKLRLWFQQHQKCICSTLSGLVPGTPIHQIVDALLTMMFRKINRSSQPLTPVTSGSSNSSASGTDESSIRLKVPAWDILEATPFVLDAALTACAHGRLSPRELATGLKELADYLPATLATIVSYFSAEVTRGIWKPACMNGTDWPSPAANLSLVEQQIKKILAATGVDVPSLAVGGSAPAMLPLPFAALVSLTITYKLDRASERALTLIGQP |
Length | 1322 |
Position | Tail |
Organism | Prunus yedoensis var. nudiflora |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.033 |
Instability index | 46.96 |
Isoelectric point | 7.34 |
Molecular weight | 147259.63 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | 3'-5' exonuclease activity GO:0008408 IEA:InterPro
nucleic acid binding GO:0003676 IEA:InterPro
|
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
rRNA processing GO:0006364 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP21262
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 192.56| 61| 71| 45| 110| 1
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45- 110 (101.28/67.12) RCGVCKKHFKSfeSQREHV.TGPLA.KENCKRVF..SEQGCDLCLKI..FDSPNSLSAHKFmcrLSAPVPLV
115- 181 (91.28/48.31) RCEEFKHDINS..SNEYHVgDGTEAiALDCEMVAggSDGSLDLCARVclIDEDETILFHTY...VQPQYPVV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 99.03| 28| 72| 789| 816| 2
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789- 816 (47.45/31.66) RTNQRKEQAPGKRRKAKAIMSRSGLTVS
864- 891 (51.59/35.11) RSSQVLRNVPGQVPGWSSIMKGSPLTPS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 176.27| 56| 356| 586| 702| 3
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629- 689 (84.88/160.79) TLKHITPESLLQLTSDTrrLLTRECKIIAR.KEFHAVLSSGSLRSSASqshGVSSSAFWLPI
1127- 1183 (91.38/40.76) TLSGLVPGTPIHQIVDA..LLTMMFRKINRsSQPLTPVTSGSSNSSAS...GTDESSIRLKV
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