<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21261

Description U-box domain-containing protein 52-like
SequenceMGRGTAETKAADEAVALAIDKDKGSQHAIKWAVDHLLTKGQHLTLLHVKHTLPNHVSVSKEGEEAENVYKKPVDAETKELFLPFRSFCKKKLIKCDEVVVEAANIPKALINYVISNSIEILVLGAPSRHSFFRSFKVTDVPSCVIEGVPDFCTLYVIGKGKISYMQTATIPPPKKARNQIHKQSSKVSESNGMQSMRKQQPRASGKRTHSAPNSLMVDDTEIKSPFTRGRASMNNSYDFSPESTDISFVSSGRASIDRMFPSLMTPRKLISAEFDNRSSASSYSRHQFIDMSSSPKDFSSSSMESGKSWLSSHNMDEVEAEMWRLKLELKQTMDVYNMACKEAVMLNHEELDQWKSEEEHRLHEAHITEEAALALIKKEREKCKAAMEVAEAAQRIAELEAHKRRNAEMKALKEAEERNQATEARAYNLSYRKYTIEEIEAGTNKFSQTDKIGEGGYGPVYRGELDHTQVAVKILRPGAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDCLFQRGNTQVIPWRLRFRISAEIATGLLFLHQSKPEPLVHRDLKPGNILLDHNYVSKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGTKSDIYSLGVMLLQIITAKPPMGLTHHVEQAIELGTFAEMLDRAVPDWPIEEALSFAKLSLQCTEMRRKDRPDLAKVVVPELNRLRALAEDSMHYNMLGGCGGGVYSPRQGSISRKQDVLSDMHLPRSGYDSSRSHSSTSSSDSETSRQ
Length776
PositionTail
OrganismPrunus yedoensis var. nudiflora
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.07
Grand average of hydropathy-0.473
Instability index51.01
Isoelectric point6.97
Molecular weight86805.77
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21261
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.30|      20|      21|     382|     401|       1
---------------------------------------------------------------------------
  382-  401 (32.44/20.82)	KCK.AAME.VAEAAQRIAELEA
  403-  424 (23.86/13.55)	KRRnAEMKaLKEAEERNQATEA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.94|      19|      21|     218|     237|       2
---------------------------------------------------------------------------
  218-  237 (29.92/19.63)	DDTEIkSPFTRGRASMNNSY
  242-  260 (31.01/16.27)	ESTDI.SFVSSGRASIDRMF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.48|      22|      47|      75|     101|       3
---------------------------------------------------------------------------
   75-  101 (29.35/40.52)	AETKELFlpFRSFCKKKLIKCdevVVE
  125-  146 (41.14/32.97)	APSRHSF..FRSFKVTDVPSC...VIE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.35|      18|      21|     313|     331|       5
---------------------------------------------------------------------------
  313-  331 (28.90/23.10)	HNMDEVEAEMWRLKlELKQ
  336-  353 (31.45/20.54)	YNMACKEAVMLNHE.ELDQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21261 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) RKQDVLSDMHLPRSGYDSSRSHSSTSSSDSETSRQ
2) TATIPPPKKARNQIHKQSSKVSESNGMQSMRKQQPRASGKRTHSAPNSLMVDDTEIKSPFTRGRASMNNSY
742
167
776
237










Molecular Recognition Features






MoRF SequenceStartStop




NANANA