<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21257

Description U-box domain-containing protein 35-like
SequenceMPSNGLLNIFSPPGQSLTLVHVKQPTAAPAPALPNKSKSGELPREVAKMNKYQVDAEAKDLFLPFRCFCTKKAIHWNEVILENADISKALINYVTANSIEILVLGAPSRNAFGFLRGKITHTRPATGRLTPKPPLHNQIQRQPSQVYGSNDTQHMLHSLQSTESEITQSSTRSQLNNIKLKPPLTRAIPITDKSYEAFPESDRLSVSSERPSTDLMSNFPSMASRMTYQSSISSELDNRSSTSSHSGIKFIDMSSGRNEFSSSSIESGRSWSSTSRDEMENEMRRLRLELKQTMEMYSMACKEAVTAKHKEKEFHQWKLKGECRIEEARQAEESAFALAQKEKLKSRAAIEAAKAAERIAQLETEKRRKAEMKALRKDEGRKNSLDGLRYRKYTIEDIEAATNEFSPARKIGEGGYGPVFRGELDHTPVAIKVLRPDAARGRSQFQKEVEVLSCIRHPNMVLLVGACPEFGCLVYEYMAKGSLEDRLFQRGNTPVIPWQLRFRIAAEIGTGLLFLHQTKPEPIVHRDLKPGNILLDHNYVSKISDVGLARLVPASVANCVSQYRITSMAGTFCYIDPEYQTTGMLGTKSDIFSLGVLLLQLITARPPMGLAHLVEEAIENGTFTEMLDPAVSDWPVEEAFKFAKLALQCTEMRRKDRPDLAKVVLPELNRLREIAEDCMNPFMLGVNGALSPIHDVMSDRHLSEYGYDSPRSPSSTSSYAGRSYR
Length725
PositionTail
OrganismPrunus yedoensis var. nudiflora
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
Aromaticity0.07
Grand average of hydropathy-0.463
Instability index58.03
Isoelectric point8.80
Molecular weight81149.74
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21257
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     206.02|      55|      59|     155|     210|       1
---------------------------------------------------------------------------
  122-  150 (38.12/17.03)	.................TRPATGRLTPKPPLHNQI...........QRQPSQVYGSN
  155-  210 (85.17/50.42)	MLHSLQSTESEIT.QSSTRSQLNNIKLKPPLTRAIPITDKSyEAFPESDRLSVSSER
  215-  269 (82.73/44.59)	LMSNFPSMASRMTyQSSISSELDN.RSSTSSHSGIKFIDMS.SGRNEFSSSSIESGR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     176.25|      56|      60|     501|     558|       2
---------------------------------------------------------------------------
  501-  558 (85.44/75.74)	RFRIAAEIGTgLLFLH...QTKPEPIVHRDLKPGNILLdHNYVSKISDVGLARLVPASVAN
  562-  620 (90.82/69.22)	QYRITSMAGT.FCYIDpeyQTTGMLGTKSDIFSLGVLL.LQLITARPPMGLAHLVEEAIEN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      69.34|      20|      20|     339|     358|       3
---------------------------------------------------------------------------
  309-  333 (18.87/10.32)	.HKEkefhqwKLKGE.CRIEEARQAEE
  339-  358 (31.96/22.98)	AQKE......KLKSR.AAIEAAKAAER
  360-  379 (18.51/ 9.97)	AQLE......TEKRRkAEMKALRKDE.
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21257 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) TRPATGRLTPKPPLHNQIQRQPSQVYGSNDTQHMLHSLQSTESEITQSSTRSQLNNIKLKPP
122
183










Molecular Recognition Features






MoRF SequenceStartStop




1) SYAGRSY
718
724