<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21238
Description |
Mediator of RNA polymerase II transcription subunit 33A-like |
Sequence | MGSMGMVMGSELERRVVELVTAKQKESPVVWAMEVGNWVEAVPSIELGEVLVSQLCFQHNRPSLWKFIDHALSSGLLCPLHVLSILSSRVVPHRRAQPEAYRLYLELLRRYAFSFGPLAGNASKEKITESIDAALQLSQTFKVHVVELGHALVLFFFSVIISLIDSTLDDWGFKMTSRKRPRSAFGGSDNDMEIDSRESQNLKVKEHHERIRKRNSLLAIEVLAKPTESRKSLVLLRLVHLNMPERFNGLLQRLRFLEGRQLASSDLNSALQLLARLSANIHSERDPLEGPIPHLEARLCVLLSIVPLAIANVLEDKIKVNSSSIEGDTVSGNMESGYGDKMDGKANTSRKQGLISSLQVLGNFSGLLCPPSSVVDSSNIAATKAARFVLNSKNEKDASGGGSDGDTSIKSGGDMRHLIVEACIARNLIDTSAYFWPGYVSASTISPSDTSPVQKSLWSTFMEGAPLRDALIKSLIRTPVSSLAEVEKLYHIALTGSEEEKSAAAKILCGASLKSGWNIQEHVVHFVVKLLSPPVPPNYSGSRSHLIDYMSMLSALLFGTSSVDTVHILSLHGMVPEVAASLITLCEVFGSLKPTSSNKSSIGDESSVYMVFSLAFLFLLRLWKFYRPPLEQYITERGGAVGGVLTLEYLLLLRNGHTAPARNETNSSGDQLESASREPMCIDSYPKLQAWYCQNKSCIASTLSGLSSGNPVHEVANKILSMIYWKITRTGDPSSNSSGPSSSSISGSPADTGEDMCQRPMLPAWEILEAIPFVLEAILTACAYGRLSSRDLTTGLRDLVEFLPASLAAIISYFSAEVTRGIWKQVAMNGIDWPSPAAILQSVESEIKEILNAVGVNVPSCGISTVTLPLPLAALVSLTITFKLEKSLEYIHAAAGLALENCASGCPWPSMPIVGCLWAQKVRRWHHFIVVSCSRSVFRQNKDAVAQLLRSCFSSFLGSLHASTSSLSSQSSVNGLLGFTIADISARPSVAPGFLYLRSCRTIHVVQHVNDVILGLVAEYAAKLAERCASTDSPSLKSSQASLSLAIAKAKEVASLGASLLCVAGGVQLVQELYRETIPTWLLSSKEEKLGEANDVSRVMEGYAMAYLVILSGSIEWGIGDNLPSWTLSRRARIVGSHMDFLAGVLEGNISLGCDPATWKAYVSCLVGLMVNFAPAWIREVKVETLRKLASGLRGWHECELALSLLERGGASAIGSAAELVHVLDGA |
Length | 1227 |
Position | Tail |
Organism | Prunus yedoensis var. nudiflora |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.114 |
Instability index | 49.01 |
Isoelectric point | 6.76 |
Molecular weight | 132966.52 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | regulation of phenylpropanoid metabolic process GO:2000762 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP21238
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 48.02| 16| 62| 336| 355| 1
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336- 355 (22.84/27.21) SGYGDkmDGkaNTSRKQG.....LI
399- 419 (25.17/14.62) SGGGS..DG..DTSIKSGgdmrhLI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 34.99| 10| 62| 803| 812| 2
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803- 812 (17.17/ 8.49) LPASLAAIIS
868- 877 (17.82/ 9.09) LPLPLAALVS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 84.04| 26| 100| 42| 72| 3
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42- 72 (38.92/42.23) VPSIELGEVLVsqLCFQHNRPSLwkfIDHAL
143- 168 (45.12/29.74) VHVVELGHALV..LFFFSVIISL...IDSTL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 205.90| 63| 65| 962| 1026| 4
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442- 476 (31.42/14.39) ...ASTISPSDTSPVQKSLwSTFMEGAPLRDALIKSLI................................
959- 1025 (87.99/64.55) SlhASTSSLSSQSSVNGLL.GFTIADISARPSVAPGFLYLRScrTIHVVQHV..NDVILGLVAEYAAKLA
1026- 1091 (86.50/55.86) ErcASTDSPSLKSS.QASL.SLAIAKAKEVASLGASLLCVAG..GVQLVQELyrETIPTWLLSSKEEKLG
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 113.56| 32| 67| 658| 694| 5
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658- 691 (56.49/44.55) TAPARNETNSSGDQLESASREP......MCidSYPKLQAW
728- 765 (57.08/29.59) TRTGDPSSNSSGPSSSSISGSPadtgedMC..QRPMLPAW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 71.58| 21| 301| 74| 96| 8
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74- 96 (34.31/29.53) SGLLCPLHvlSILSSRVVPHRRA
365- 385 (37.27/25.06) SGLLCPPS..SVVDSSNIAATKA
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