<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21221
Description |
Mediator of RNA polymerase II transcription subunit 34 isoform X1 |
Sequence | MSRFSDQIKILLDQQERLYERQSELKAILEACKESGYPVNGTSTTVEDWSGPFEWDSQADDTRFNIFGISAYRANQREIINAVMSGKDVLVIMAAGGGKSLCYQLPAILRDGVALVVSPLLSLIQDQVMGLAALGIPAHMLTSTTSKEEEKLIYKALEKGEGDLKILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKSLGILKTQFPNVPVIALTATATQKVQSDLMEMLHIPRCVKFVSTVNRPNLFYMVREKSSVGKVVVDEIAEFIQDSYSHNDSGIVYCFSRKECEQVAKELRERGISALHYHADMDVNARENVHMRWSNGKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSQCLLYFRPGDVPRQSSMVFYENSGLQNLYDIVRYCSQKDSVAVVRFSAILLSHYRTAMGCVTTVHFQMRLKKWMPLVMRSLLFLCCKIHKKMIRD |
Length | 488 |
Position | Unknown |
Organism | Prunus yedoensis var. nudiflora |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> fabids> Rosales> Rosaceae> Amygdaloideae> Amygdaleae> Prunus.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.178 |
Instability index | 42.21 |
Isoelectric point | 8.73 |
Molecular weight | 55239.33 |
Publications | |
Function
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | ATP binding GO:0005524 IEA:UniProtKB-KW
helicase activity GO:0004386 IEA:InterPro
nucleic acid binding GO:0003676 IEA:InterPro
|
GO - Biological Process | DNA recombination GO:0006310 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP21221
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 207.36| 68| 250| 68| 141| 1
---------------------------------------------------------------------------
68- 141 (104.50/84.39) GISA..YRA....NQREIINAVMSGKDVLVIMAagggkSLCYQLpAILRDGVALVVSPLLSLIQD...QVMGLAAL.GIPAHML
319- 396 (102.86/66.89) GISAlhYHAdmdvNARENVHMRWSNGKLQVIVG.....TVAFGM.GINKPDVRFVIHHSLSKSMEtyyQESGRAGRdGLPSQCL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 68.56| 20| 123| 287| 307| 2
---------------------------------------------------------------------------
287- 307 (34.31/28.20) FIQDSYSHNDSGIV.YCfSRKE
412- 432 (34.26/22.41) FYENSGLQNLYDIVrYC.SQKD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 155.69| 48| 153| 7| 56| 3
---------------------------------------------------------------------------
7- 56 (73.89/70.24) QIKILLDQQERLyERQSELKAILEACKESG....YPVNgTSTTVEDWSGPFEWD
163- 214 (81.79/65.12) DLKILYVTPEKI.SKSKRFMSKLEKCHHAGrlslISID.EAHCCSQWGHDFRPD
---------------------------------------------------------------------------
|