<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP21203

Description U-box domain-containing protein 34
SequenceMWHPPPGVHGERMHTPNKLIAVAIDKDRGSQIALKWTVDHLLARGQTVLLIHVKLKQSANSSGQSTPTTCLDLDYPMDYLLSDLTETCDTESNQISDEAGSGNSELDPQTKELFLPFRVFCTRKDVQCHDVVLDDTDVVKAIVEYVNRTGIEVLILGATTRGGLLRFKAKDIPGGILKGVPDFCTVHVISKSGKIASTRAASRPAPFVHPLRHQLMQPASTKFAPFEGSTPSAASSRGPYSGGPKPVCDPPPSTLQSDTMNMKSPFTHRKGPNGKPYEISLPDTDISYVSSGRPSIDNIYSSFSDGYDGGGPTPPRLSGFSDFETQSFDSTQFGRRSVDTLTPPELSFSSFESDRPSISQGPVDDMEAEMRRLKQELKQTMELYSTACREALTAKQKAMELQRWKQEEQRRLEEARLAEEAALALAEKEKAKSRAAIEHAEAAQRLAELEAQKRISAEMKALKEAEEKNKILNKLTNSDFRYRKYTIEEIESATDYFAQTRKIGEGGYGPVYKCYLDHTPVAVKVLRPDAAHGRQQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMSNGSLEDRLFHRGKTPPLSWQQRFRIAAEIATGLLFLHQSKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDVYSLGIIFLQILTAKPPMGLTHYVDRAIEKGTFNEMLDPDIPDWPVDEALSLAKLSLQCSELRRKDRPDLGKVVLPQLERLRALAEDHTCPSLMYNSNISPNHSQVSLSRDNLSYPNTMPSSYESSRSQ
Length811
PositionTail
OrganismNicotiana attenuata (Coyote tobacco)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> asterids> lamiids> Solanales> Solanaceae> Nicotianoideae> Nicotianeae> Nicotiana.
Aromaticity0.07
Grand average of hydropathy-0.481
Instability index47.92
Isoelectric point6.25
Molecular weight90275.34
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP21203
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     119.26|      38|     326|      15|      57|       1
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   15-   57 (49.61/35.70)	TPNKLIAVAIDKDRGSqIAlKWTVDHLLARGQTvllIHVKLKQ
  342-  379 (69.65/34.62)	TPPELSFSSFESDRPS.IS.QGPVDDMEAEMRR...LKQELKQ
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     155.17|      30|      32|     218|     247|       2
---------------------------------------------------------------------------
  218-  247 (56.58/33.39)	PAST.......KFAPFEGSTPS.....AASSRGPYSGGPKPV
  251-  279 (32.57/15.79)	PPSTlqsdtmnMKSPF............THRKGP.NGKPYEI
  282-  314 (37.62/19.49)	P.DT.......DISYVSSGRPSidniySSFSDGYDGGGPTP.
  317-  338 (28.40/12.73)	..LS.......GFSDFE..TQS.....FDSTQ....FGRRSV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     260.84|      85|     397|      69|     165|       4
---------------------------------------------------------------------------
   69-  165 (122.17/115.67)	TCLDLDYpMDYLLSDLTETCD..TESNQISdEAGSGnseldPQTKELF..LPFRVFCTRKD.VQCHDVVLDDTDVVKAIveyvNRTGIeVLILGATTRGGLL
  476-  565 (138.67/93.42)	TNSDFRY.RKYTIEEIESATDyfAQTRKIG.EGGYG.....PVYKCYLdhTPVAVKVLRPDaAHGRQQFQQEVEVLSCI....RHPNM.VLLLGACPEYGCL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.13|      19|      37|     409|     432|       6
---------------------------------------------------------------------------
  409-  432 (21.18/27.89)	QRRLEEArlaeEAALALAEKEkAK
  434-  452 (29.95/19.02)	RAAIEHA....EAAQRLAELE.AQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP21203 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ASTKFAPFEGSTPSAASSRGPYSGGPKPVCDPPPSTLQSDTMNMKSPFTHRKGPNGKPYEISLPDTDISY
2) TQFGRRSVDTLTPPELSFSSFESDRPSISQGPVDDMEAEMRRLKQE
219
331
288
376










Molecular Recognition Features






MoRF SequenceStartStop




NANANA